RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TMEM109Q9BVC6 243 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 CCDC90BQ9GZT6 254 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 TUBB1Q9H4B7 451 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 NIPAL2Q9H841 368 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 POLE4Q9NR33 117 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 DPM3Q9P2X0 92 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 PEX16Q9Y5Y5 336 aa3.51□□□□□ -1.85
SDCBP-205ENST00000447267 IGKV1D-17A0A075B6S4 117 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 NCBP2LA6PVI3 153 aaKnown RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 CD300LBA8K4G0 201 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 KRBOX1C9JBD0 128 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 H0Y8G0 127 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 SULT1C2O00338 296 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 DLGAP1O14490 977 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 CDIPTO14735 213 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 DLEU1O43261 78 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 OR6A2O95222 327 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 MT-ATP6P00846 226 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 IFNA5P01569 189 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 AMBPP02760 352 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 CHRNGP07510 517 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 LGALS1P09382 135 aaKnown RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 OR2T7P0C7T2 308 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 RRASP10301 218 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 ZNF182P17025 639 aaPredicted RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 TAC1P20366 129 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 ATP6V1B2P21281 511 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 MSR1P21757 451 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 DTYMKP23919 212 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 MT3P25713 68 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 PSMB6P28072 239 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 FMO3P31513 532 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 KIR2DS2P43631 304 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 SERPINB10P48595 397 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 FHITP49789 147 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 CEBPGP53567 150 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 TMBIM6P55061 237 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 AP3S2P59780 193 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 UBE2G2P60604 165 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 FGL1Q08830 312 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 AQP6Q13520 282 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 GK3PQ14409 553 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 ZNF74Q16587 644 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 RSPO1Q2MKA7 263 aaPredicted RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 KRTAP27-1Q3LI81 207 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 CLLU1Q5K131 121 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 LCN8Q6JVE9 175 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 DLEU7Q6UYE1 221 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 CYP4Z1Q86W10 505 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 RIMKLAQ8IXN7 391 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 C9orf62Q8N4C0 152 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 STX19Q8N4C7 294 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 C12orf45Q8N5I9 185 aaPredicted RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 OR9G4Q8NGQ1 327 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 OR1F12Q8NHA8 337 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 NEK7Q8TDX7 302 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 FLYWCH2Q96CP2 140 aaKnown RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 L3HYPDHQ96EM0 354 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 FAM210BQ96KR6 192 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 OR52B2Q96RD2 323 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 MRPL57Q9BQC6 102 aaKnown RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 PRSS27Q9BQR3 290 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 TMEM43Q9BTV4 400 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 PRRG3Q9BZD7 231 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 TLNRD1Q9H1K6 362 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 MCUBQ9NWR8 336 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 ELF5Q9UKW6 265 aaPredicted RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 SSR3Q9UNL2 185 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 NOP16Q9Y3C1 178 aaKnown RBP3.5□□□□□ -1.85
SDCBP-205ENST00000447267 DSCAML1Q8TD84 2053 aa3.5□□□□□ -1.85
SDCBP-205ENST00000447267 DEFB131BA0A096LNP1 70 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 A0A0B4J2E0 115 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 A0A1B0GX12 115 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FAM90A18PA6NE21 464 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FAM90A16PA6NEW6 464 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FAM90A20PA6NIJ5 464 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FAM90A9PA6NNJ1 464 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FAM90A12PA8MX19 464 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FAM90A5PA8MXJ8 464 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FGF16O43320 207 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 UPK1BO75841 260 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 MMP23AO75900 390 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 RBP4P02753 201 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 ASAH2BP0C7U1 165 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FAM90A15PP0C7V4 464 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 FAM90A14PP0C7W9 464 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 ZNF25P17030 456 aaPredicted RBP3.49□□□□□ -1.85
SDCBP-205ENST00000447267 RPL35AP18077 110 aaKnown RBP3.49□□□□□ -1.85
SDCBP-205ENST00000447267 CAPGP40121 348 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 CEACAM6P40199 344 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 MAP2K4P45985 399 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 APOC4P55056 127 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 SYNJ2BPP57105 145 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 CD47Q08722 323 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 BAK1Q16611 211 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 LPCAT3Q6P1A2 487 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 TCF23Q7RTU1 214 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 DPY19L4Q7Z388 723 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 SNX29P2Q8IUI4 249 aa3.49□□□□□ -1.85
SDCBP-205ENST00000447267 TCTE3Q8IZS6 198 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms