RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CX3CL1P78423 397 aa16.09■□□□□ 0.17
CPNE1-219ENST00000440240 TMEM267Q0VDI3 215 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-219ENST00000440240 DCUN1D4Q92564 292 aa16.09■□□□□ 0.17
CPNE1-219ENST00000440240 TM2D1Q9BX74 207 aa16.09■□□□□ 0.17
CPNE1-219ENST00000440240 RIMS4Q9H426 269 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-219ENST00000440240 CHMP1AQ9HD42 196 aaPredicted RBP16.09■□□□□ 0.17
CPNE1-219ENST00000440240 PLEKHJ1Q9NW61 149 aa16.09■□□□□ 0.17
CPNE1-219ENST00000440240 OR5H14A6NHG9 310 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 RRHO14718 337 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 ST8SIA5O15466 376 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 NAPSAO96009 420 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 SRMP19623 302 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 CRIP2P52943 208 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-219ENST00000440240 GABPB1Q06547 395 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-219ENST00000440240 INSL4Q14641 139 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 PLGLAQ15195 96 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 RBM48Q5RL73 367 aaKnown RBP16.08■□□□□ 0.16
CPNE1-219ENST00000440240 RNLSQ5VYX0 342 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 ZNF880Q6PDB4 577 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 FAM131AQ6UXB0 335 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 LRRTM1Q86UE6 522 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 SVOPQ8N4V2 548 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 RNF5Q99942 180 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 MND1Q9BWT6 205 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 FKBP14Q9NWM8 211 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 RNF150Q9ULK6 438 aa16.08■□□□□ 0.16
CPNE1-219ENST00000440240 FOXA2Q9Y261 457 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-219ENST00000440240 A0A1W2PN81 502 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 LINC01619G3V211 115 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 C3orf84H3BNL1 204 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 ITGB1BP1O14713 200 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 RBBP9O75884 186 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 GSTP1P09211 210 aaKnown RBP16.07■□□□□ 0.16
CPNE1-219ENST00000440240 CT45A6P0DMU7 189 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 CT45A5P0DMU8 189 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 CT45A7P0DMV0 189 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 CD37P11049 281 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 CHRNA7P36544 502 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 ECSCRQ19T08 205 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 C19orf54Q5BKX5 351 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 PYHIN1Q6K0P9 492 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 MOB1BQ7L9L4 216 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 SETD6Q8TBK2 473 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 TMED9Q9BVK6 235 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 TOLLIPQ9H0E2 274 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 FBXL15Q9H469 300 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 NUBP2Q9Y5Y2 271 aa16.07■□□□□ 0.16
CPNE1-219ENST00000440240 H7C2Y5 167 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 SLC22A1O15245 554 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 BPNT1O95861 308 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 CD40LGP29965 261 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 RCN1Q15293 331 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 HSD17B12Q53GQ0 312 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 RPL39P5Q59GN2 51 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 CD200R1LQ6Q8B3 271 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 CEACAM19Q7Z692 300 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 OR5AN1Q8NGI8 311 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 DLX4Q92988 240 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-219ENST00000440240 ISYNA1Q9NPH2 558 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 WASHC3Q9Y3C0 194 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 FBXO7Q9Y3I1 522 aa16.06■□□□□ 0.16
CPNE1-219ENST00000440240 TRBV6-6A0A0A6YYG2 114 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 TMEM14DPA8MWL7 114 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 H0YJW9 148 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 SOX15O60248 233 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 SAP30O75446 220 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 CDK1P06493 297 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 ZBTB25P24278 435 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 CEACAM6P40199 344 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 UNC119Q13432 240 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 SPHARQ15513 63 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 AKIRIN2Q53H80 203 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 OR6M1Q8NGM8 313 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 EDARADDQ8WWZ3 215 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 ABHD14BQ96IU4 210 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 AGMATQ9BSE5 352 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 NICN1Q9BSH3 213 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 URM1Q9BTM9 101 aaKnown RBP16.05■□□□□ 0.16
CPNE1-219ENST00000440240 MGAT4AQ9UM21 535 aa16.05■□□□□ 0.16
CPNE1-219ENST00000440240 FCN1O00602 326 aa16.04■□□□□ 0.16
CPNE1-219ENST00000440240 LGALS1P09382 135 aaKnown RBP16.04■□□□□ 0.16
CPNE1-219ENST00000440240 EGR2P11161 476 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-219ENST00000440240 QRFPP83859 136 aa16.04■□□□□ 0.16
CPNE1-219ENST00000440240 NDPQ00604 133 aa16.04■□□□□ 0.16
CPNE1-219ENST00000440240 OGFRL1Q5TC84 451 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-219ENST00000440240 ZNF562Q6V9R5 426 aa16.04■□□□□ 0.16
CPNE1-219ENST00000440240 GLDNQ6ZMI3 551 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-219ENST00000440240 PPP1R27Q86WC6 154 aa16.04■□□□□ 0.16
CPNE1-219ENST00000440240 ABHD5Q8WTS1 349 aa16.04■□□□□ 0.16
CPNE1-219ENST00000440240 ALX4Q9H161 411 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-219ENST00000440240 TPSG1Q9NRR2 321 aa16.04■□□□□ 0.16
CPNE1-219ENST00000440240 A3GALT2U3KPV4 340 aa16.04■□□□□ 0.16
CPNE1-219ENST00000440240 PTGES3LE9PB15 166 aa16.03■□□□□ 0.16
CPNE1-219ENST00000440240 ARPC1BO15143 372 aaKnown RBP16.03■□□□□ 0.16
CPNE1-219ENST00000440240 HSPA12AO43301 675 aa16.03■□□□□ 0.16
CPNE1-219ENST00000440240 HSPB1P04792 205 aaKnown RBP16.03■□□□□ 0.16
CPNE1-219ENST00000440240 UCHL1P09936 223 aa16.03■□□□□ 0.16
CPNE1-219ENST00000440240 SLURP1P55000 103 aa16.03■□□□□ 0.16
CPNE1-219ENST00000440240 ACTBL2Q562R1 376 aa16.03■□□□□ 0.16
CPNE1-219ENST00000440240 OR6Q1Q8NGQ2 317 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms