RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 OPN1MWP04001 364 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 OPN1MW2P0DN77 364 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 OPN1MW3P0DN78 364 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 CYB561P49447 251 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 CARD18P57730 90 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 OR8G1Q15617 311 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 DPPA3Q6W0C5 159 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 ZDHHC23Q8IYP9 409 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 TMEM37Q8WXS4 190 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 PCGF1Q9BSM1 259 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 PSENENQ9NZ42 101 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 PPP1R3CQ9UQK1 317 aa12.16□□□□□ -0.46
MSH5-206ENST00000423982 UBE2L5PA0A1B0GUS4 154 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 LRRC3CA6NJW4 275 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 EREGO14944 169 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 CNOT4O95628 575 aaKnown RBP12.15□□□□□ -0.46
MSH5-206ENST00000423982 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
MSH5-206ENST00000423982 ZNF124Q15973 351 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 SSX2Q16385 188 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 SPANXN5Q5MJ07 72 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 NCR3LG1Q68D85 454 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 ZNF66Q6ZN08 573 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 OR5R1Q8NH85 324 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 CPT1CQ8TCG5 803 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 FER1L6-AS2Q96M78 137 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 OR4C12Q96R67 309 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 HIPK2Q9H2X6 1198 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 ATP23Q9Y6H3 246 aa12.15□□□□□ -0.46
MSH5-206ENST00000423982 A0A1W2PPQ1 181 aa12.15□□□□□ -0.47
MSH5-206ENST00000423982 ZNF737O75373 536 aa12.15□□□□□ -0.47
MSH5-206ENST00000423982 IGKV1-5P01602 117 aa12.15□□□□□ -0.47
MSH5-206ENST00000423982 PAX1P15863 534 aa12.15□□□□□ -0.47
MSH5-206ENST00000423982 FOXG1P55316 489 aaPredicted RBP12.15□□□□□ -0.47
MSH5-206ENST00000423982 FOXO1Q12778 655 aa12.15□□□□□ -0.47
MSH5-206ENST00000423982 GGNQ86UU5 652 aa12.15□□□□□ -0.47
MSH5-206ENST00000423982 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.47
MSH5-206ENST00000423982 SYNGR2O43760 224 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 CYTIPO60759 359 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 LILRA1O75019 489 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 IFNA10P01566 189 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 P04436 131 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 MMP7P09237 267 aaPredicted RBP12.14□□□□□ -0.47
MSH5-206ENST00000423982 CLDN15P56746 228 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 B3GALT5-AS1P59052 145 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 RAC3P60763 192 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 FGF12P61328 243 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 OR8G2PQ6IF36 304 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
MSH5-206ENST00000423982 MRPL30Q8TCC3 161 aaKnown RBP12.14□□□□□ -0.47
MSH5-206ENST00000423982 KCNE4Q8WWG9 221 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 ZNF552Q9H707 407 aaPredicted RBP12.14□□□□□ -0.47
MSH5-206ENST00000423982 SLC25A22Q9H936 323 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 GPR35Q9HC97 309 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 DEPPQ9NTK1 212 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 PRSS50Q9UI38 385 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 WASF3Q9UPY6 502 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 DUXBA0A1W2PPF3 345 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 OR4A8P0C604 315 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 GNB2P62879 340 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 ZNF324BQ6AW86 544 aaPredicted RBP12.14□□□□□ -0.47
MSH5-206ENST00000423982 ABLIM2Q6H8Q1 611 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 LHX4Q969G2 390 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 OR51B6Q9H340 312 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 SRD5A3Q9H8P0 318 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 AURKAIP1Q9NWT8 199 aaPredicted RBP12.14□□□□□ -0.47
MSH5-206ENST00000423982 SMG1Q96Q15 3661 aaKnown RBP12.14□□□□□ -0.47
MSH5-206ENST00000423982 SVILO95425 2214 aa12.14□□□□□ -0.47
MSH5-206ENST00000423982 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
MSH5-206ENST00000423982 A0A1B0GUS0 222 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 PINLYPA6NC86 204 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 ZNF503-AS2A6NEH8 195 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 NGFP01138 241 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 IGLV2-14P01704 120 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 FGF7P21781 194 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 BMP5P22003 454 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 RPL23P62829 140 aaKnown RBP12.13□□□□□ -0.47
MSH5-206ENST00000423982 WIPI1Q5MNZ9 446 aaPredicted RBP12.13□□□□□ -0.47
MSH5-206ENST00000423982 FDCSPQ8NFU4 85 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 OR10D3Q8NH80 312 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 FUT9Q9Y231 359 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 MKRN2OSH3BPM6 223 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 DVL1O14640 695 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 TRAPPC6AO75865 159 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 GALR1P47211 349 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 RNPS1Q15287 305 aaKnown RBP12.13□□□□□ -0.47
MSH5-206ENST00000423982 OR1C1Q15619 314 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 Q6ZS49 121 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 MRGPRGQ86SM5 289 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 OR51G1Q8NGK1 321 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 C2orf88Q9BSF0 95 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 PRRG4Q9BZD6 226 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 OR2W1Q9Y3N9 320 aa12.13□□□□□ -0.47
MSH5-206ENST00000423982 MED12LQ86YW9 2145 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 KIR2DS1A0A191URI9 304 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 KIR2DS4P43632 304 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 KIR2DS1Q14954 304 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 LRRC75BQ2VPJ9 315 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms