RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 SMIM6P0DI80 62 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 MPC1LP0DKB6 136 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 RPL7P18124 248 aaKnown RBP4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 IL3RAP26951 378 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 BLVRBP30043 206 aaPredicted RBP4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 PIGPP57054 158 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 HERVK_113P61574 105 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 RPS28P62857 69 aaKnown RBP4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CRADDP78560 199 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 IBA57Q5T440 356 aaKnown RBP4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 ZNF773Q6PK81 442 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 C2orf66Q6UXQ4 117 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 LINC00596Q86U02 117 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 KLHDC8BQ8IXV7 354 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 ZNF615Q8N8J6 731 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 DCAF4L2Q8NA75 395 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 OR51H1Q8NH63 302 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 NPRL2Q8WTW4 380 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 TMEM190Q8WZ59 177 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 OR5P3Q8WZ94 311 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 PLEKHB2Q96CS7 222 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 C18orf15Q96N68 181 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 GPR82Q96P67 336 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 DOHHQ9BU89 302 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 TMEM70Q9BUB7 260 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CHST6Q9GZX3 395 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 SLC23A2Q9UGH3 650 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 RTL1A6NKG5 1358 aa4.1□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CHD5Q8TDI0 1954 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 DOCK3Q8IZD9 2030 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 IGLV8-61A0A075B6I0 122 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 hCG_1818297A0A087WSY0 165 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 TMED7-TICAM2A0A0A6YYA0 188 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 A0A1B0GX51 115 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 C9orf170A2RU37 121 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CD300LBA8K4G0 201 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 A8MT66 165 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 KRTAP4-16G5E9R7 235 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 DNASE2O00115 360 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 MRASO14807 208 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 COX7A2P2O60397 106 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 SRSF10O75494 262 aaKnown RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 IGF2P01344 180 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 PATE4P0C8F1 98 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 TDGF1P13385 188 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CTSEP14091 401 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 ORM2P19652 201 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 RPS3P23396 243 aaKnown RBP eCLIP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 PSMB3P49720 205 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 LHX2P50458 406 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 TDGF1P3P51864 188 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 DEFA3P59666 94 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 RRAS2P62070 204 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 ELF3P78545 371 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CXCL6P80162 114 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 LY6DQ14210 128 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 SSX1Q16384 188 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 ZNF239Q16600 458 aaKnown RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 LTC4SQ16873 150 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 ORMDL2Q53FV1 153 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CASC10Q5T4H9 136 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 HSD17B13Q7Z5P4 300 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 ZNF584Q8IVC4 421 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 Q8NBF4 154 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 OR2T27Q8NH04 317 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 OR1L1Q8NH94 360 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 LMO3Q8TAP4 145 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CANT1Q8WVQ1 401 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 STARD4Q96DR4 205 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 CDC42EP4Q9H3Q1 356 aaKnown RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 PTGES2Q9H7Z7 377 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 MED11Q9P086 117 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 ANAPC10Q9UM13 185 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 PROCRQ9UNN8 238 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 DCCP43146 1447 aa4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 DENND4BO75064 1496 aaPredicted RBP4.09□□□□□ -1.75
PTP4A1P1-201ENST00000420539 THSD7BQ9C0I4 1608 aa4.09□□□□□ -1.76
PTP4A1P1-201ENST00000420539 SPEF2Q9C093 1822 aa4.09□□□□□ -1.76
PTP4A1P1-201ENST00000420539 MYH10P35580 1976 aa4.09□□□□□ -1.76
PTP4A1P1-201ENST00000420539 TRAV36DV7A0A075B6V5 113 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 A0A096LPI6 279 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 OR4C45A6NMZ5 311 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 ZNF705GA8MUZ8 300 aaPredicted RBP4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 NDUFC2-KCTD14E9PQ53 114 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 AIPO00170 330 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 LGALS9O00182 355 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 SETD1AO15047 1707 aaKnown RBP4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 ZNF682O95780 498 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 DBIP07108 87 aaKnown RBP4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 C8GP07360 202 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 SOD3P08294 240 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 ITGB4P16144 1822 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 ZNF25P17030 456 aaPredicted RBP4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 MDH2P40926 338 aaKnown RBP4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 HERVK_113P63121 156 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 CACNA1SQ13698 1873 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 RHEBQ15382 184 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 GRK1Q15835 563 aa4.08□□□□□ -1.76
PTP4A1P1-201ENST00000420539 ZFP69Q49AA0 526 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms