RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RORCP51449 518 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 VBP1P61758 197 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 ZNF260Q3ZCT1 412 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 UBE2NLQ5JXB2 153 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 ZNF833PQ6ZTB9 187 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 C5orf24Q7Z6I8 188 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 CENPVQ7Z7K6 275 aaPredicted RBP11.74□□□□□ -0.53
CHD1-202ENST00000414220 OR5H6Q8NGV6 325 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 ACOT12Q8WYK0 555 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 AP3S1Q92572 193 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 SLC25A46Q96AG3 418 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 RASL11BQ9BPW5 248 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 C11orf54Q9H0W9 315 aaPredicted RBP11.74□□□□□ -0.53
CHD1-202ENST00000414220 RDH8Q9NYR8 311 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 OR1A1Q9P1Q5 309 aa11.74□□□□□ -0.53
CHD1-202ENST00000414220 SAA2-SAA4A0A096LPE2 208 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 SMIM31A0A1B0GVY4 71 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 TMEM235A6NFC5 223 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 SAA2P0DJI9 122 aaPredicted RBP11.73□□□□□ -0.53
CHD1-202ENST00000414220 TGFBR1P36897 503 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 LSAMPQ13449 338 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 GPR107Q5VW38 600 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 MZT2AQ6P582 158 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 Q6ZPA2 131 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 FOXRED2Q8IWF2 684 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 CMTM3Q96MX0 182 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 CABLES2Q9BTV7 478 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 ABCG5Q9H222 651 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 IFI27L2Q9H2X8 130 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 SERTAD4Q9NUC0 356 aa11.73□□□□□ -0.53
CHD1-202ENST00000414220 ZNF230Q9UIE0 474 aaPredicted RBP11.73□□□□□ -0.53
CHD1-202ENST00000414220 TRBV6-7A0A0A0MS04 114 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 OR5H14A6NHG9 310 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 XRCC3O43542 346 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
CHD1-202ENST00000414220 FBXO24O75426 580 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 CBX5P45973 191 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 OR3A3P47888 321 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 NCS1P62166 190 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 SRSF4Q08170 494 aaKnown RBP11.72□□□□□ -0.53
CHD1-202ENST00000414220 C2orf68Q2NKX9 166 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 CNIH2Q6PI25 160 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 ODF3L1Q8IXM7 274 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 C5orf56Q8N8D9 126 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 SAMD12Q8N8I0 201 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.72□□□□□ -0.53
CHD1-202ENST00000414220 MAFIPQ8WZ33 124 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 ABHD14BQ96IU4 210 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 NABP2Q9BQ15 211 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 ZNF251Q9BRH9 671 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 GON7Q9BXV9 100 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 TOLLIPQ9H0E2 274 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 LIN7CQ9NUP9 197 aaKnown RBP11.72□□□□□ -0.53
CHD1-202ENST00000414220 KIAA1456Q9P272 454 aa11.72□□□□□ -0.53
CHD1-202ENST00000414220 H7C2Y5 167 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 KCNAB3O43448 404 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 GABARAPO95166 117 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 SOX6P35712 828 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 ARPC4P59998 168 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 SLC35B1P78383 322 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 CBX3Q13185 183 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 IGSF11Q5DX21 431 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 PRR31Q5SQ13 230 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 TMEM69Q5SWH9 247 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 SLC35E3Q7Z769 313 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 OR4X2Q8NGF9 303 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 NUDCD2Q8WVJ2 157 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 SLC25A38Q96DW6 304 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 MRPL20Q9BYC9 149 aaKnown RBP11.71□□□□□ -0.53
CHD1-202ENST00000414220 COMMD3Q9UBI1 195 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 RNF150Q9ULK6 438 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 GAB2Q9UQC2 676 aa11.71□□□□□ -0.53
CHD1-202ENST00000414220 IGKV1-6A0A0C4DH72 117 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 ZNF736B4DX44 427 aaPredicted RBP11.7□□□□□ -0.54
CHD1-202ENST00000414220 RBBP9O75884 186 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 SLC22A5O76082 557 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 APOA2P02652 100 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 TFAP2AP05549 437 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 OR8U9P0C7N5 309 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 ALDH3B2P48448 385 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 TAGLNQ01995 201 aaKnown RBP11.7□□□□□ -0.54
CHD1-202ENST00000414220 MMDQ15546 238 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 Q8N6K4 173 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 OR8U1Q8NH10 309 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 CHPT1Q8WUD6 406 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 RNF5Q99942 180 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 WNT10AQ9GZT5 417 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 AUNIPQ9H7T9 357 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 ANXA10Q9UJ72 324 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 WASHC3Q9Y3C0 194 aa11.7□□□□□ -0.54
CHD1-202ENST00000414220 APOA1P02647 267 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 OPN1MWP04001 364 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 AMY1AP04745 511 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 AMY2AP04746 511 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 CSF1P09603 554 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 OPN1MW2P0DN77 364 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 OPN1MW3P0DN78 364 aa11.69□□□□□ -0.54
CHD1-202ENST00000414220 ZNF182P17025 639 aaPredicted RBP11.69□□□□□ -0.54
CHD1-202ENST00000414220 RPL5P46777 297 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms