RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 POMPQ9Y244 141 aa12.61□□□□□ -0.39
CHMP3-203ENST00000409225 EXOGQ9Y2C4 368 aaKnown RBP12.61□□□□□ -0.39
CHMP3-203ENST00000409225 UBE2QL1A1L167 161 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 H7C2Y5 167 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 ST8SIA5O15466 376 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 YPEL1O60688 119 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 TRBV12-3P01733 135 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 CD2P06729 351 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 CT45A6P0DMU7 189 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 CT45A5P0DMU8 189 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 CT45A7P0DMV0 189 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 BDKRB2P30411 391 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 ALDH3A2P51648 485 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 GYS2P54840 703 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 DYRK1AQ13627 763 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 TATDN3Q17R31 274 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 RPL39P5Q59GN2 51 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 AMIGO2Q86SJ2 522 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 OR2K2Q8NGT1 345 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 ORAI1Q96D31 301 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 YPEL2Q96QA6 119 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 PEF1Q9UBV8 284 aaKnown RBP12.6□□□□□ -0.39
CHMP3-203ENST00000409225 SLC23A1Q9UHI7 598 aa12.6□□□□□ -0.39
CHMP3-203ENST00000409225 NUPR2A6NF83 97 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 OR5H14A6NHG9 310 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 OR11H12B2RN74 326 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 H0YJW9 148 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 DEDDO75618 318 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 MECP2P51608 486 aaKnown RBP12.59□□□□□ -0.39
CHMP3-203ENST00000409225 GBX2P52951 348 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-203ENST00000409225 HTD2P86397 168 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 PSG5Q15238 335 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 CD300EQ496F6 205 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-203ENST00000409225 FAM71F2Q6NXP2 309 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 GPR148Q8TDV2 347 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 TRUB1Q8WWH5 349 aaKnown RBP12.59□□□□□ -0.39
CHMP3-203ENST00000409225 MYCBPQ99417 103 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-203ENST00000409225 MBNL3Q9NUK0 354 aaKnown RBP12.59□□□□□ -0.39
CHMP3-203ENST00000409225 WASHC3Q9Y3C0 194 aa12.59□□□□□ -0.39
CHMP3-203ENST00000409225 H3BUA1 57 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 SLC22A1O15245 554 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 CA11O75493 328 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 SC5DO75845 299 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 RBBP9O75884 186 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 GTF2A1P52655 376 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-203ENST00000409225 MRPL28Q13084 256 aaKnown RBP12.58□□□□□ -0.4
CHMP3-203ENST00000409225 GPR176Q14439 515 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 FXYD3Q14802 87 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 DMKNQ6E0U4 476 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-203ENST00000409225 LAX1Q8IWV1 398 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 MRPL30Q8TCC3 161 aaKnown RBP12.58□□□□□ -0.4
CHMP3-203ENST00000409225 ZNF184Q99676 751 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-203ENST00000409225 AASSQ9UDR5 926 aa12.58□□□□□ -0.4
CHMP3-203ENST00000409225 ZNF785A8K8V0 405 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 OR2A4O95047 310 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 FASP25445 335 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 MC5RP33032 325 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 GUCA2BQ16661 112 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 LY6G6FQ5SQ64 297 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 SLC25A30Q5SVS4 291 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 MEDAGQ5VYS4 303 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 CEMP1Q6PRD7 247 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-203ENST00000409225 ZNF554Q86TJ5 538 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 BVESQ8NE79 360 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 GATAD1Q8WUU5 269 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 MUL1Q969V5 352 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 GALMQ96C23 342 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 OVOL2Q9BRP0 275 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 BANF2Q9H503 90 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 ERVK13-1Q9NX77 482 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 PIPOXQ9P0Z9 390 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 PEMTQ9UBM1 199 aa12.57□□□□□ -0.4
CHMP3-203ENST00000409225 RAB29O14966 203 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 GYG2O15488 501 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 AADACP22760 399 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 SNRPGP62308 76 aaKnown RBP12.56□□□□□ -0.4
CHMP3-203ENST00000409225 RIPK1Q13546 671 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 ZNF343Q6P1L6 599 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 GLIPR1L1Q6UWM5 242 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 IL1F10Q8WWZ1 152 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 GHSRQ92847 366 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 RNF5Q99942 180 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 SELENOIQ9C0D9 397 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 PARP12Q9H0J9 701 aaKnown RBP12.56□□□□□ -0.4
CHMP3-203ENST00000409225 STEAP1Q9UHE8 339 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 GMPPBQ9Y5P6 360 aa12.56□□□□□ -0.4
CHMP3-203ENST00000409225 A0A0J9YWU9 116 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 SNTNA6NMZ2 147 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 BAG2O95816 211 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 CPEP16870 476 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 FUT3P21217 361 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 RPS16P62249 146 aaKnown RBP12.55□□□□□ -0.4
CHMP3-203ENST00000409225 EWSR1Q01844 656 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHMP3-203ENST00000409225 DNAL1Q4LDG9 190 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 C6orf141Q5SZD1 244 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 OR5AN1Q8NGI8 311 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 DYNLRB2Q8TF09 96 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
CHMP3-203ENST00000409225 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms