RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 MAP3K1Q13233 1512 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 A0A087WX48 190 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGHV6-1A0A0B4J1U7 121 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 EXOC1LA0A1B0GW35 172 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 A0A1W2PP18 115 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 TRAPPC2LH3BP13 241 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 MFSD11O43934 449 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 GNG7O60262 68 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 CNMDO75829 334 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR2B3O76000 313 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 IFNA1P01562 189 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGHV3-11P01762 117 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 STC1P52823 247 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 TPI1P60174 286 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 EMX1Q04741 257 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 BIKQ13323 160 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 RSU1Q15404 277 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 TSNQ15631 228 aaKnown RBP3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 CEACAM16Q2WEN9 425 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM128Q5BJH2 165 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 RNASE13Q5GAN3 156 aaKnown RBP3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM78BQ5VT40 261 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM215Q68D42 235 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM71E1Q6IPT2 247 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 HAGHLQ6PII5 290 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 Q6ZR03 302 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 LINC01551Q86U37 167 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 MDP1Q86V88 176 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 LRRC28Q86X40 367 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 NIT1Q86X76 327 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 LRRC25Q8N386 305 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 MUC15Q8N387 334 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM86BQ8N661 226 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR4M1Q8NGD0 313 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR51Q1Q8NH59 317 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 APOBEC3DQ96AK3 386 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 LINC00477Q96M19 166 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 TAPBPLQ9BX59 468 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 SNHG12Q9BXW3 62 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 SLC17A9Q9BYT1 436 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 NXF2Q9GZY0 626 aaKnown RBP3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 TXNIPQ9H3M7 391 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 COPZ2Q9P299 210 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 ANXA10Q9UJ72 324 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 SNX12Q9UMY4 172 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 BAIAP2Q9UQB8 552 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 HSPB11Q9Y547 144 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 NACAE9PAV3 2078 aa3.11□□□□□ -1.91
HMGB1P13-201ENST00000406019 YEATS2Q9ULM3 1422 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 NUP153P49790 1475 aaKnown RBP3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 LMTK2Q8IWU2 1503 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM223A0PJW6 202 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 C5orf63A6NC05 138 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 GMNCA6NCL1 334 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 SIGLEC16A6NMB1 481 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 I3L521 148 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 M0R1X1 148 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 CCL25O15444 150 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 FOXH1O75593 365 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 GADD45GO95257 159 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 KDELR1P24390 212 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 RPL12P30050 165 aaKnown RBP3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 REG1BP48304 166 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 RPS20P60866 119 aaKnown RBP3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 TBPL1P62380 186 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 SNRNP35Q16560 246 aaKnown RBP3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 FBXL19-AS1Q494R0 122 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM78Q5T7P6 136 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 Q5W150 140 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM19A5Q7Z5A7 132 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 MRPL52Q86TS9 123 aaKnown RBP3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 DOLPP1Q86YN1 238 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 BAP18Q8IXM2 172 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 UBALD2Q8IYN6 164 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR4C13Q8NGP0 309 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR13G1Q8NGZ3 307 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR1L1Q8NH94 360 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 GALMQ96C23 342 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 MRAP2Q96G30 205 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 GINS3Q9BRX5 216 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 PDCD10Q9BUL8 212 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 MS4A6AQ9H2W1 248 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF355PQ9NSJ1 428 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 C14orf105Q9NVL8 296 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM14AQ9Y6G1 99 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 PTPRTO14522 1441 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 CLIP1P30622 1438 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 TNS2Q63HR2 1409 aa3.1□□□□□ -1.91
HMGB1P13-201ENST00000406019 NLRP1Q9C000 1473 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 CACNA1SQ13698 1873 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM135AQ9P2D6 1515 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 BAZ1AQ9NRL2 1556 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 AHDC1Q5TGY3 1603 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 NUP214P35658 2090 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 ANKRD12Q6UB98 2062 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGLV4-69A0A075B6H9 119 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGHV7-4-1A0A0J9YVY3 117 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR5H1A6NKK0 313 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 F6UZH7 168 aa3.09□□□□□ -1.91
HMGB1P13-201ENST00000406019 NDUFS5O43920 106 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms