RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 SYNGR2O43760 224 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 OR2H2O95918 312 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 RNF224P0DH78 156 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 ACP1P24666 158 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 S100GP29377 79 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 IL2RGP31785 369 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 ELLP55199 621 aaPredicted RBP17.44■□□□□ 0.38
CLK3-202ENST00000395066 ZNF585BQ52M93 769 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 MBD3L1Q8WWY6 194 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 DEFB127Q9H1M4 99 aa17.44■□□□□ 0.38
CLK3-202ENST00000395066 CFAP47Q6ZTR5 3102 aa17.43■□□□□ 0.38
CLK3-202ENST00000395066 TFF1P04155 84 aa17.43■□□□□ 0.38
CLK3-202ENST00000395066 MDKP21741 143 aaPredicted RBP17.43■□□□□ 0.38
CLK3-202ENST00000395066 SPANXN5Q5MJ07 72 aa17.43■□□□□ 0.38
CLK3-202ENST00000395066 P2RX4Q99571 388 aa17.43■□□□□ 0.38
CLK3-202ENST00000395066 RNF150Q9ULK6 438 aa17.43■□□□□ 0.38
CLK3-202ENST00000395066 OR5R1Q8NH85 324 aa17.43■□□□□ 0.38
CLK3-202ENST00000395066 RIMS4Q9H426 269 aaPredicted RBP17.43■□□□□ 0.38
CLK3-202ENST00000395066 PLK3Q9H4B4 646 aa17.43■□□□□ 0.38
CLK3-202ENST00000395066 CDH20Q9HBT6 801 aa17.43■□□□□ 0.38
CLK3-202ENST00000395066 HMGB3O15347 200 aaKnown RBP17.42■□□□□ 0.38
CLK3-202ENST00000395066 RPS16P62249 146 aaKnown RBP17.42■□□□□ 0.38
CLK3-202ENST00000395066 DCAF10Q5QP82 559 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 BEND4Q6ZU67 534 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 ZNF525Q8N782 197 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 CTDSP1Q9GZU7 261 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 OR14J1Q9UGF5 321 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 IL17BQ9UHF5 180 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 MPC1Q9Y5U8 109 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 USF3Q68DE3 2245 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 CEBPZOSA8MTT3 80 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 CDIPTO14735 213 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 VAX2Q9UIW0 290 aa17.42■□□□□ 0.38
CLK3-202ENST00000395066 OR5B21A6NL26 309 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 SLC25A6P12236 298 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 MEOX1P50221 254 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 C1orf210Q8IVY1 113 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 SCCPDHQ8NBX0 429 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 OR10A7Q8NGE5 316 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 OR4X1Q8NH49 305 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 SPRY4Q9C004 299 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 OR2J1Q9GZK6 312 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 TRBV6-6A0A0A6YYG2 114 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 CEACAM6P40199 344 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 ATP1A1-AS1Q5TC04 95 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 OR8G2PQ6IF36 304 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 DBX2Q6ZNG2 339 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 CXorf67Q86X51 503 aaPredicted RBP17.41■□□□□ 0.38
CLK3-202ENST00000395066 TMEM183AQ8IXX5 376 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 LILRB2Q8N423 598 aa17.41■□□□□ 0.38
CLK3-202ENST00000395066 PSMG3Q9BT73 122 aaPredicted RBP17.41■□□□□ 0.38
CLK3-202ENST00000395066 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.4■□□□□ 0.38
CLK3-202ENST00000395066 MRGPRGQ86SM5 289 aa17.4■□□□□ 0.38
CLK3-202ENST00000395066 TECTAO75443 2155 aa17.4■□□□□ 0.38
CLK3-202ENST00000395066 UBE2L5PA0A1B0GUS4 154 aa17.4■□□□□ 0.38
CLK3-202ENST00000395066 J3QT63 122 aa17.4■□□□□ 0.38
CLK3-202ENST00000395066 MDH2P40926 338 aaKnown RBP17.4■□□□□ 0.38
CLK3-202ENST00000395066 GPR87Q9BY21 358 aa17.4■□□□□ 0.38
CLK3-202ENST00000395066 SLC31A2O15432 143 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 RAMP3O60896 148 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 GRPP07492 148 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 WDR25Q64LD2 544 aaPredicted RBP17.39■□□□□ 0.37
CLK3-202ENST00000395066 LINC00596Q86U02 117 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 DRAM1Q8N682 238 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 OR4C12Q96R67 309 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 STRADBQ9C0K7 418 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.39■□□□□ 0.37
CLK3-202ENST00000395066 CD55P08174 381 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 ZNF497Q6ZNH5 498 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 ARRDC1-AS1Q9H2J1 176 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 SRD5A3Q9H8P0 318 aa17.39■□□□□ 0.37
CLK3-202ENST00000395066 TMEM265A0A087WTH1 108 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 PIGBOS1A0A0B4J2F0 54 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 IFNA1P01562 189 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 PAX1P15863 534 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 IDH3GP51553 393 aaPredicted RBP17.38■□□□□ 0.37
CLK3-202ENST00000395066 SERF2P84101 59 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 JOSD1Q15040 202 aaPredicted RBP17.38■□□□□ 0.37
CLK3-202ENST00000395066 ACSF3Q4G176 576 aaPredicted RBP17.38■□□□□ 0.37
CLK3-202ENST00000395066 ZNF808Q8N4W9 903 aaPredicted RBP17.38■□□□□ 0.37
CLK3-202ENST00000395066 WDYHV1Q96HA8 205 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 RBKSQ9H477 322 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 DVL1O14640 695 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 NXPH2O95156 264 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 LRRC75BQ2VPJ9 315 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 BCL2L2Q92843 193 aaPredicted RBP17.38■□□□□ 0.37
CLK3-202ENST00000395066 PKIBQ9C010 78 aa17.38■□□□□ 0.37
CLK3-202ENST00000395066 MAP1LC3B2A6NCE7 125 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 IGKV1D-33P01593 117 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 IGKV1-33P01594 117 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 FOSL1P15407 271 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 LINC00205P59089 165 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 TAS2R60P59551 318 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 ADIRFQ15847 76 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 Q3ZCU0 254 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 TMEM41BQ5BJD5 291 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 RNFT1Q5M7Z0 435 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 MAP1LC3BQ9GZQ8 125 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 GP6Q9HCN6 339 aa17.37■□□□□ 0.37
CLK3-202ENST00000395066 NAT8Q9UHE5 227 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms