RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 OR1A1Q9P1Q5 309 aa12.91□□□□□ -0.34
PTPRK-208ENST00000392449 RGS11O94810 467 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 HLA-DRB1P01911 266 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 UCHL1P09936 223 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 AQP4P55087 323 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 RPS25P62851 125 aaKnown RBP12.9□□□□□ -0.34
PTPRK-208ENST00000392449 IRF3Q14653 427 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 RNLSQ5VYX0 342 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 ZNF880Q6PDB4 577 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 TMEM91Q6ZNR0 172 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 ZNF491Q8N8L2 437 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 KCNG3Q8TAE7 436 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 LPAR5Q9H1C0 372 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 PLA2G2EQ9NZK7 142 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 AK3Q9UIJ7 227 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 ZNF580Q9UK33 172 aa12.9□□□□□ -0.34
PTPRK-208ENST00000392449 TRAV41A0A0B4J266 112 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 IGLV1-40P01703 118 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 HSMCR30P0CW71 290 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 CT45A6P0DMU7 189 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 CT45A5P0DMU8 189 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 CT45A7P0DMV0 189 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 OR5H8P0DN80 308 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 ECSCRQ19T08 205 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 ZNF260Q3ZCT1 412 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 LY6G6FQ5SQ64 297 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 LIN54Q6MZP7 749 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 TMEM65Q6PI78 240 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 NPBQ8NG41 125 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 NRG4Q8WWG1 115 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 VCXQ9H320 206 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 FBXL15Q9H469 300 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 PLEKHJ1Q9NW61 149 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 STEAP1Q9UHE8 339 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 AK6Q9Y3D8 172 aaKnown RBP12.89□□□□□ -0.35
PTPRK-208ENST00000392449 A3GALT2U3KPV4 340 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 TENM3Q9P273 2699 aa12.89□□□□□ -0.35
PTPRK-208ENST00000392449 I3L521 148 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 FCN1O00602 326 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 SOX15O60248 233 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 NDUFA3O95167 84 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 BPNT1O95861 308 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 CD37P11049 281 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 CLDN12P56749 244 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 LINC00205P59089 165 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 OR6M1Q8NGM8 313 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 UFD1Q92890 307 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 SLC23A1Q9UHI7 598 aa12.88□□□□□ -0.35
PTPRK-208ENST00000392449 LSM4Q9Y4Z0 139 aaKnown RBP12.88□□□□□ -0.35
PTPRK-208ENST00000392449 RAMP3O60896 148 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 RAB9AP51151 201 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 PLA2G7Q13093 441 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 DRAXINQ8NBI3 349 aaPredicted RBP12.87□□□□□ -0.35
PTPRK-208ENST00000392449 OR1N2Q8NGR9 330 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 UBE2E2Q96LR5 201 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 PLGRKTQ9HBL7 147 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 SCN3BQ9NY72 215 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 KIAA1456Q9P272 454 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 RNF150Q9ULK6 438 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 GAB2Q9UQC2 676 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 VSIG4Q9Y279 399 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 LRRC42Q9Y546 428 aa12.87□□□□□ -0.35
PTPRK-208ENST00000392449 A0A1W2PN81 502 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 FOXI3A8MTJ6 420 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-208ENST00000392449 H0YJW9 148 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 RAB29O14966 203 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 SCTP09683 121 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 ARSBP15848 533 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 CHRNA7P36544 502 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 CX3CL1P78423 397 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 HLA-DRB3P79483 266 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 ZNF616Q08AN1 781 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 MINDY2Q8NBR6 621 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 CLCC1Q96S66 551 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 ASCL2Q99929 193 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 AGMATQ9BSE5 352 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 FAM103A1Q9BTL3 118 aaKnown RBP12.86□□□□□ -0.35
PTPRK-208ENST00000392449 C11orf54Q9H0W9 315 aaPredicted RBP12.86□□□□□ -0.35
PTPRK-208ENST00000392449 PIPOXQ9P0Z9 390 aa12.86□□□□□ -0.35
PTPRK-208ENST00000392449 RYR3Q15413 4870 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 H7C2Y5 167 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 SLC17A2O00624 439 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 RRHO14718 337 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 PROP1O75360 226 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
PTPRK-208ENST00000392449 CEACAM6P40199 344 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 MAP2K4P45985 399 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 VEGFCP49767 419 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 TMEM50BP56557 158 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 PLGLAQ15195 96 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 FAM71F2Q6NXP2 309 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 MOB1BQ7L9L4 216 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 ABHD5Q8WTS1 349 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 ARHGAP5-AS1Q96IT6 56 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 TRBV6-6A0A0A6YYG2 114 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 IGKV1-6A0A0C4DH72 117 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 OR8U8P0C7N1 319 aa12.85□□□□□ -0.35
PTPRK-208ENST00000392449 SLURP1P55000 103 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms