RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SELLP14151 372 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 PRDX2P32119 198 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 DVL1P1P54792 670 aaPredicted RBP13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 RPS16P62249 146 aaKnown RBP13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 GUK1Q16774 197 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 SLC35E4Q6ICL7 350 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 FGFRL1Q8N441 504 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 ZNRF1Q8ND25 227 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 CRYAAP02489 173 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 PLA2G5P39877 138 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 LYPD6BQ8NI32 183 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 ABHD17AQ96GS6 310 aa13.37□□□□□ -0.27
CNKSR1-202ENST00000374253 NBASA2RRP1 2371 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 IGKV1D-17A0A075B6S4 117 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 ARL16Q0P5N6 197 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 ZNF645Q8N7E2 425 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 MUCL1Q96DR8 90 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 RARRES2Q99969 163 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 C20orf24Q9BUV8 137 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 KCNJ16Q9NPI9 418 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 PSG11Q9UQ72 335 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 IGF2RP11717 2491 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 C17orf98A8MV24 154 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 K7N7A8 449 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 SYNGR2O43760 224 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 EIF3GO75821 320 aaKnown RBP eCLIP13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 NUBP1P53384 320 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 SPINK9Q5DT21 86 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 SLC25A24Q6NUK1 477 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 SPAG16Q8N0X2 631 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 CISD2Q8N5K1 135 aaKnown RBP13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 TCTEX1D2Q8WW35 142 aa13.36□□□□□ -0.27
CNKSR1-202ENST00000374253 S1PR2O95136 353 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 ACAA1P09110 424 aaPredicted RBP13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 NBL1P41271 181 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 Q3ZCU0 254 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 SPANXN5Q5MJ07 72 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 TIMM23BQ5SRD1 257 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 DUX4L9Q6RFH8 374 aaPredicted RBP13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 FAM180AQ6UWF9 173 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 STX12Q86Y82 276 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 GCSAMQ8N6F7 178 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 ITLN1Q8WWA0 313 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 FAM234AQ9H0X4 552 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 DSCAMO60469 2012 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 SNAPINO95295 136 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 EDDM3BP56851 147 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 BRWD1-AS2P59051 145 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 RPL23AP62750 156 aaKnown RBP13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 FOXC1Q12948 553 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 UTF1Q5T230 341 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 THNSL2Q86YJ6 484 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 CLRN3Q8NCR9 226 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 RSG1Q9BU20 258 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 SCRT1Q9BWW7 348 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 TP53TG5Q9Y2B4 290 aa13.35□□□□□ -0.27
CNKSR1-202ENST00000374253 OR13C7P0DN81 318 aa13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 EIF2S3P41091 472 aaKnown RBP13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 KLF3P57682 345 aaPredicted RBP13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 TGIF2LYQ8IUE0 185 aa13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 ATP5SQ99766 215 aa13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 LINC00473A8K010 186 aa13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 CEBPGP53567 150 aa13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 DEFB108BQ8NET1 73 aa13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 LEAP2Q969E1 77 aa13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 MRPL37Q9BZE1 423 aaKnown RBP13.34□□□□□ -0.27
CNKSR1-202ENST00000374253 ZNF737O75373 536 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 CRYABP02511 175 aaKnown RBP13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 SULT1A1P50225 295 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 HAPLN4Q86UW8 402 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 PRR7Q8TB68 274 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 LRFN3Q9BTN0 628 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 PTPRQQ9UMZ3 2332 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 SRRM5B3KS81 715 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 BAXQ07812 192 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 OR8G2PQ6IF36 304 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 MEGF10Q96KG7 1140 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 RAB40CQ96S21 281 aa13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 STRAPQ9Y3F4 350 aaKnown RBP13.33□□□□□ -0.28
CNKSR1-202ENST00000374253 POLEQ07864 2286 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 CLDN1O95832 211 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 DAOP14920 347 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 HAGHQ16775 308 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 PRR30Q53SZ7 412 aaPredicted RBP13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 ZCCHC24Q8N2G6 241 aaKnown RBP13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 FAM57AQ8TBR7 257 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 DCAF16Q9NXF7 216 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 GNG12Q9UBI6 72 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 CLN8Q9UBY8 286 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 A0A1W2PPE3 182 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 MKRN2OSH3BPM6 223 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 MMP9P14780 707 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 CCKARP32238 428 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 TIMP3P35625 211 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 RAB5CP51148 216 aa13.32□□□□□ -0.28
CNKSR1-202ENST00000374253 NKX6-1P78426 367 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms