RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 A8MXE2 369 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 TOR1AO14656 332 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 MGST3O14880 152 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 SYNGR2O43760 224 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 SCAF4O95104 1147 aaKnown RBP11.74□□□□□ -0.53
USF1-202ENST00000368020 MUC1P15941 1255 aaPredicted RBP11.74□□□□□ -0.53
USF1-202ENST00000368020 ZNF16P17020 682 aaPredicted RBP11.74□□□□□ -0.53
USF1-202ENST00000368020 TNFSF4P23510 183 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 CEBPDP49716 269 aaPredicted RBP11.74□□□□□ -0.53
USF1-202ENST00000368020 HBG1P69891 147 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 HBG2P69892 147 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 ZNF616Q08AN1 781 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 HSD17B11Q8NBQ5 300 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 OR1L1Q8NH94 360 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 CD300LFQ8TDQ1 290 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 GPHA2Q96T91 129 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 MS4A7Q9GZW8 240 aaPredicted RBP11.74□□□□□ -0.53
USF1-202ENST00000368020 MAGT1Q9H0U3 335 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 CACNG5Q9UF02 275 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 KPTNQ9Y664 436 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 KALRNO60229 2985 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 A0A1B0GW64 132 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 TSPAN4O14817 238 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 TXNL1O43396 289 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 LY86O95711 162 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 IFNA5P01569 189 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 SNCAP37840 140 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 CLINT1Q14677 625 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 CLEC9AQ6UXN8 241 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 NUP37Q8NFH4 326 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 OR2G3Q8NGZ4 309 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 MRGPRDQ8TDS7 321 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 BSCL2Q96G97 398 aaPredicted RBP11.73□□□□□ -0.53
USF1-202ENST00000368020 MEGF10Q96KG7 1140 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 JPT1Q9UK76 154 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 RNF150Q9ULK6 438 aa11.73□□□□□ -0.53
USF1-202ENST00000368020 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 ZNF737O75373 536 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 IGKV1-39P01597 117 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 IGKV1D-39P04432 117 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 DYNLT3P51808 116 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 RAB2AP61019 212 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 TMEM171Q8WVE6 324 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 OR2V2Q96R30 315 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 COQ3Q9NZJ6 369 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 A0A0G2JRQ6 117 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 KIAA1324LA8MWY0 1029 aaPredicted RBP11.72□□□□□ -0.53
USF1-202ENST00000368020 K7N7A8 449 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 SFTA3P0C7M3 94 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 ADCYAP1P18509 176 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 OMGP23515 440 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 ATP6V0CP27449 155 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 ARHGDIBP52566 201 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 CASP6P55212 293 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 PAX9P55771 341 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 AKR1C1Q04828 323 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 EIF4EBP1Q13541 118 aaPredicted RBP11.72□□□□□ -0.53
USF1-202ENST00000368020 TMEM108Q6UXF1 575 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 CD177Q8N6Q3 437 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 DIRC2Q96SL1 478 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 PARD6GQ9BYG4 376 aaPredicted RBP11.72□□□□□ -0.53
USF1-202ENST00000368020 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 OR6C3Q9NZP0 311 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
USF1-202ENST00000368020 CFAP46Q8IYW2 2715 aa11.71□□□□□ -0.53
USF1-202ENST00000368020 FAM208BQ5VWN6 2430 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 ODAMA1E959 279 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 TMEM50AO95807 157 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 LHBP01229 141 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 CD80P33681 288 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 GLIPR1P48060 266 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 TMEM30BQ3MIR4 351 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 TMEM182Q6ZP80 229 aaPredicted RBP11.71□□□□□ -0.54
USF1-202ENST00000368020 PUSL1Q8N0Z8 303 aaKnown RBP11.71□□□□□ -0.54
USF1-202ENST00000368020 FGFRL1Q8N441 504 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 ZNF561Q8N587 486 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 OR52L2PQ8NGH6 319 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 VKORC1Q9BQB6 163 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 SH3BGRL3Q9H299 93 aa11.71□□□□□ -0.54
USF1-202ENST00000368020 IGKV1D-17A0A075B6S4 117 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 DNASE2O00115 360 aaPredicted RBP11.7□□□□□ -0.54
USF1-202ENST00000368020 ITGB1BP1O14713 200 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 YPEL1O60688 119 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 CST7O76096 145 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 CLDN14O95500 239 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 HBE1P02100 147 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 OR8U8P0C7N1 319 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 PTAFRP25105 342 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 CD40P25942 277 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
USF1-202ENST00000368020 TLE4Q04727 773 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 AKR1C8PQ5T2L2 129 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 SLC25A24Q6NUK1 477 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 ATRAIDQ6UW56 229 aa11.7□□□□□ -0.54
USF1-202ENST00000368020 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms