RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 C19orf54Q5BKX5 351 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 SIGIRRQ6IA17 410 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 LIN54Q6MZP7 749 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 ZNF554Q86TJ5 538 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 NPBQ8NG41 125 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 Q96M66 194 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 FBXO7Q9Y3I1 522 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 STARD9Q9P2P6 4700 aa11.63□□□□□ -0.55
GDPD3-201ENST00000360688 SOX15O60248 233 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 MRPS14O60783 128 aaKnown RBP11.62□□□□□ -0.55
GDPD3-201ENST00000360688 NDUFA3O95167 84 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 GLAP06280 429 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 GP9P14770 177 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 MGMTP16455 207 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 OR3A3P47888 321 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 SLURP1P55000 103 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 NDPQ00604 133 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 TBCEQ15813 527 aaPredicted RBP11.62□□□□□ -0.55
GDPD3-201ENST00000360688 AWAT2Q6E213 333 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 ZNF833PQ6ZTB9 187 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 LYPD6Q86Y78 171 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 MRPL30Q8TCC3 161 aaKnown RBP11.62□□□□□ -0.55
GDPD3-201ENST00000360688 YTHDF1Q9BYJ9 559 aaKnown RBP11.62□□□□□ -0.55
GDPD3-201ENST00000360688 TOLLIPQ9H0E2 274 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 KCNIP1Q9NZI2 227 aa11.62□□□□□ -0.55
GDPD3-201ENST00000360688 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 A0A1W2PN81 502 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 LINC01619G3V211 115 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 YPEL1O60688 119 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 CRTAPO75718 401 aaPredicted RBP11.61□□□□□ -0.55
GDPD3-201ENST00000360688 MAS1P04201 325 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 HSMCR30P0CW71 290 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
GDPD3-201ENST00000360688 LYL1P12980 280 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 CHRNA7P36544 502 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 CRIP2P52943 208 aaPredicted RBP11.61□□□□□ -0.55
GDPD3-201ENST00000360688 HTD2P86397 168 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 MLLT11Q13015 90 aaPredicted RBP11.61□□□□□ -0.55
GDPD3-201ENST00000360688 TRAM1Q15629 374 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 ECSCRQ19T08 205 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 ACSM3Q53FZ2 586 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 LY6G6FQ5SQ64 297 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 LIPKQ5VXJ0 399 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 ACSM6Q6P461 480 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 CDH26Q8IXH8 852 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 NKAIN3Q8N8D7 197 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 YPEL2Q96QA6 119 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 TMED9Q9BVK6 235 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 TPSG1Q9NRR2 321 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 KIAA1456Q9P272 454 aa11.61□□□□□ -0.55
GDPD3-201ENST00000360688 IGHV4OR15-8A0A075B7B6 117 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 A0A087WW49 117 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 TRIM64CA6NLI5 447 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 PDCD6O75340 191 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 PSMA1P25786 263 aaKnown RBP11.6□□□□□ -0.55
GDPD3-201ENST00000360688 MAP2K4P45985 399 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 TPBGQ13641 420 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 INSL4Q14641 139 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 ZNF660Q6AZW8 331 aaPredicted RBP11.6□□□□□ -0.55
GDPD3-201ENST00000360688 ZNF367Q7RTV3 350 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 SVOPQ8N4V2 548 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 OR6Q1Q8NGQ2 317 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 CASTOR1Q8WTX7 329 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 ARPC1AQ92747 370 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 MGLLQ99685 303 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 CST11Q9H112 138 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 GHITMQ9H3K2 345 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 ZMAT4Q9H898 229 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 GAR1Q9NY12 217 aaKnown RBP11.6□□□□□ -0.55
GDPD3-201ENST00000360688 FOXA2Q9Y261 457 aaPredicted RBP11.6□□□□□ -0.55
GDPD3-201ENST00000360688 RGS11O94810 467 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 LGALS1P09382 135 aaKnown RBP11.6□□□□□ -0.55
GDPD3-201ENST00000360688 CPEP16870 476 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 CX3CL1P78423 397 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 FAM131AQ6UXB0 335 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 OR2AK2Q8NG84 335 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 FAM46BQ96A09 425 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 GALMQ96C23 342 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 CITED4Q96RK1 184 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 FBXL15Q9H469 300 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 NUBP2Q9Y5Y2 271 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 A3GALT2U3KPV4 340 aa11.6□□□□□ -0.55
GDPD3-201ENST00000360688 BIRC6Q9NR09 4857 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 RRHO14718 337 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 EGR2P11161 476 aaPredicted RBP11.59□□□□□ -0.55
GDPD3-201ENST00000360688 HMGN3Q15651 99 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 HSD17B12Q53GQ0 312 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 FAM71F2Q6NXP2 309 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 PHYHIPQ92561 330 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 IFI27L2Q9H2X8 130 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 PALMDQ9NP74 551 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 ACOT13Q9NPJ3 140 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 LRRC42Q9Y546 428 aa11.59□□□□□ -0.55
GDPD3-201ENST00000360688 LCE6AA0A183 80 aa11.58□□□□□ -0.56
GDPD3-201ENST00000360688 FCN1O00602 326 aa11.58□□□□□ -0.56
GDPD3-201ENST00000360688 ST8SIA5O15466 376 aa11.58□□□□□ -0.56
GDPD3-201ENST00000360688 OR8U9P0C7N5 309 aa11.58□□□□□ -0.56
GDPD3-201ENST00000360688 CT45A6P0DMU7 189 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms