RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MMP24Q9Y5R2 645 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 IGHV3OR15-7A0A075B7D8 119 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 FAM90A26D6RGX4 464 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 K7N7A8 449 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 SYNGR2O43760 224 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 NXPH3O95157 252 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 OMGP23515 440 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 DYNLT3P51808 116 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 DEFA5Q01523 94 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 CLINT1Q14677 625 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 FGFRL1Q8N441 504 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 OR5C1Q8NGR4 320 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 RFESDQ8TAC1 157 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 EDARADDQ8WWZ3 215 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 LRRC46Q96FV0 321 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 WSB1Q9Y6I7 421 aa13.93□□□□□ -0.18
SAMM50-201ENST00000350028 PRRC2CQ9Y520 2896 aaKnown RBP13.92□□□□□ -0.18
SAMM50-201ENST00000350028 TRIM77I1YAP6 450 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 TXNL1O43396 289 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 CAMLGP49069 296 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 ASCL1P50553 236 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 TAS2R30P59541 319 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 BTN1A1Q13410 526 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 IZUMO4Q1ZYL8 232 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 C10orf91Q5T1B1 145 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 STX12Q86Y82 276 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 WFDC8Q8IUA0 241 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 ZNF808Q8N4W9 903 aaPredicted RBP13.92□□□□□ -0.18
SAMM50-201ENST00000350028 C5orf30Q96GV9 206 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 TSNAXQ99598 290 aaKnown RBP13.92□□□□□ -0.18
SAMM50-201ENST00000350028 DCTN5Q9BTE1 182 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 JPT1Q9UK76 154 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 ITPR1Q14643 2758 aa13.92□□□□□ -0.18
SAMM50-201ENST00000350028 TOR1AO14656 332 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 DFFBO76075 338 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 CST7O76096 145 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 CLDN1O95832 211 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 SULT1A1P50225 295 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 TMPRSS3P57727 454 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 RPL30P62888 115 aaKnown RBP13.91□□□□□ -0.18
SAMM50-201ENST00000350028 SRSF3P84103 164 aaKnown RBP13.91□□□□□ -0.18
SAMM50-201ENST00000350028 AKR1C1Q04828 323 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 FAM53AQ6NSI3 398 aaPredicted RBP13.91□□□□□ -0.18
SAMM50-201ENST00000350028 ZNF561Q8N587 486 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 Q8TCH9 128 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 TCTEX1D2Q8WW35 142 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 GNPNAT1Q96EK6 184 aaPredicted RBP13.91□□□□□ -0.18
SAMM50-201ENST00000350028 DIRC2Q96SL1 478 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 HSD17B10Q99714 261 aaKnown RBP13.91□□□□□ -0.18
SAMM50-201ENST00000350028 SH3BGRL3Q9H299 93 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 GCM1Q9NP62 436 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 RAB9BQ9NP90 201 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 UQCC1Q9NVA1 299 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 COQ3Q9NZJ6 369 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 OR6C3Q9NZP0 311 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 SH3BGRL2Q9UJC5 107 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 CARHSP1Q9Y2V2 147 aaKnown RBP13.91□□□□□ -0.18
SAMM50-201ENST00000350028 NBEAQ8NFP9 2946 aa13.91□□□□□ -0.18
SAMM50-201ENST00000350028 IGHV3-43A0A0B4J1X8 118 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 DPRXA6NFQ7 191 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 RNASEK-C17orf49H0YIS7 233 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 YPEL1O60688 119 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 TSPAN15O95858 294 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 IGHV3-43DP0DP04 118 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 ATP6V0CP27449 155 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 CD80P33681 288 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 C14orf79Q96F83 325 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 YPEL2Q96QA6 119 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 ATP5SQ99766 215 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 C19orf12Q9NSK7 152 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 PSG11Q9UQ72 335 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 LAMP3Q9UQV4 416 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 UMAD1C9J7I0 102 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 F8W036 122 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 F2RL2O00254 374 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 PRH1P02810 166 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 MUC1P15941 1255 aaPredicted RBP13.9□□□□□ -0.18
SAMM50-201ENST00000350028 UCNP55089 124 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 MORN2Q502X0 79 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 ATRAIDQ6UW56 229 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 ZNF295-AS1Q8N0V1 137 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 SVBPQ8N300 66 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.9□□□□□ -0.18
SAMM50-201ENST00000350028 ZNRF1Q8ND25 227 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 SDSLQ96GA7 329 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 AGMATQ9BSE5 352 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 SEC11CQ9BY50 192 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 ESRP2Q9H6T0 727 aaKnown RBP13.9□□□□□ -0.18
SAMM50-201ENST00000350028 PSENENQ9NZ42 101 aa13.9□□□□□ -0.18
SAMM50-201ENST00000350028 C17orf98A8MV24 154 aa13.89□□□□□ -0.19
SAMM50-201ENST00000350028 SIGLEC5O15389 551 aa13.89□□□□□ -0.19
SAMM50-201ENST00000350028 ST8SIA5O15466 376 aa13.89□□□□□ -0.19
SAMM50-201ENST00000350028 CD5P06127 495 aa13.89□□□□□ -0.19
SAMM50-201ENST00000350028 THBDP07204 575 aa13.89□□□□□ -0.19
SAMM50-201ENST00000350028 P0C879 139 aa13.89□□□□□ -0.19
SAMM50-201ENST00000350028 DVL1P1P54792 670 aaPredicted RBP13.89□□□□□ -0.19
SAMM50-201ENST00000350028 PRR30Q53SZ7 412 aaPredicted RBP13.89□□□□□ -0.19
SAMM50-201ENST00000350028 UNQ6494/PRO21346Q6UXR6 183 aa13.89□□□□□ -0.19
SAMM50-201ENST00000350028 TMEM182Q6ZP80 229 aaPredicted RBP13.89□□□□□ -0.19
SAMM50-201ENST00000350028 TMEM217Q8N7C4 229 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms