RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 FAM27E3Q08E93 113 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 PRR30Q53SZ7 412 aaPredicted RBP4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 COMMD2Q86X83 199 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 DRAM1Q8N682 238 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 OR5D18Q8NGL1 313 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 ST8SIA2Q92186 375 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 MUCL1Q96DR8 90 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 ESRP2Q9H6T0 727 aaKnown RBP4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 ZMAT3Q9HA38 289 aaKnown RBP4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 PARP11Q9NR21 331 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 TMEM14BQ9NUH8 114 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 UBQLN2Q9UHD9 624 aa4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 CARHSP1Q9Y2V2 147 aaKnown RBP4.42□□□□□ -1.7
PRPF4B-201ENST00000337659 SSNA1O43805 119 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 IFNA6P05013 189 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR5AC1P0C628 307 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 PPIAL4GP0DN37 164 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 ZP3P21754 424 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 DUTP33316 252 aaKnown RBP4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 RAB5CP51148 216 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 TMEM177Q53S58 311 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR5AN1Q8NGI8 311 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 ADTRPQ96IZ2 230 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR2V2Q96R30 315 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 SPIN2AQ99865 258 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 SPIN2BQ9BPZ2 258 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 ZNF665Q9H7R5 613 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR5AC2Q9NZP5 309 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 NOTCH3Q9UM47 2321 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 MEIS3P1A6NDR6 274 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 CDIPTO14735 213 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 IGLV1-47P01700 117 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 VDAC2P45880 294 aaPredicted RBP4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 IL34Q6ZMJ4 242 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 SLC35G3Q8N808 338 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR11H6Q8NGC7 330 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 NEU4Q8WWR8 484 aaPredicted RBP4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 METRNQ9UJH8 293 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 TINAGQ9UJW2 476 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 ARL2-SNX15V9GYD0 113 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 MPTX1A8MV57 137 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 HBZP02008 142 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 CD5P06127 495 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 TNFRSF1AP19438 455 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 LUMP51884 338 aaPredicted RBP4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 TLE4Q04727 773 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 ARFRP1Q13795 201 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR13A1Q8NGR1 328 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR8S1Q8NH09 359 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR10J5Q8NHC4 309 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 AJUBAQ96IF1 538 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 RAB40CQ96S21 281 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 RELNP78509 3460 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 A0A096LNT2 108 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 ATP6V1G2-DDX39BF2Z307 99 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 SMLR1H3BR10 107 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 M0R1W7 72 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR3A3P47888 321 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 HFEQ30201 348 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 C1orf229Q6ZS94 237 aaPredicted RBP4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 CLUHP3Q96NS8 147 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 ST6GALNAC5Q9BVH7 336 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 SDHAF2Q9NX18 166 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 IDI2-AS1Q9NZ38 188 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 OR1A1Q9P1Q5 309 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 FREM1Q5H8C1 2179 aa4.41□□□□□ -1.7
PRPF4B-201ENST00000337659 TOR1AO14656 332 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 TIMM8AO60220 97 aaPredicted RBP4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 SMCO1Q147U7 214 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 SPNS3Q6ZMD2 512 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 Q8N6K4 173 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 CNEP1R1Q8N9A8 125 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 LRRC29Q8WV35 223 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 EDARADDQ8WWZ3 215 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 CCDC120Q96HB5 630 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 ZNF488Q96MN9 340 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 TAF9BQ9HBM6 251 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 BET1LQ9NYM9 111 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 RDH8Q9NYR8 311 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 KCNIP3Q9Y2W7 256 aa4.4□□□□□ -1.7
PRPF4B-201ENST00000337659 A0A0G2JRQ6 117 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 BET1O15155 118 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 IGLV2-23P01705 113 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 DAOP14920 347 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 M6PRP20645 277 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 DYNLT3P51808 116 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 NKX2-5P52952 324 aaPredicted RBP4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 TSPAN5P62079 268 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 CDSNQ15517 529 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 THOC7Q6I9Y2 204 aaKnown RBP4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 CISD2Q8N5K1 135 aaKnown RBP4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 PPP1R35Q8TAP8 253 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 GALMQ96C23 342 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 MS4A5Q9H3V2 200 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 CBLN4Q9NTU7 201 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF701Q9NV72 531 aaPredicted RBP4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 DYSFO75923 2080 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 MSGN1A6NI15 193 aa4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 OR7C1O76099 320 aaPredicted RBP4.4□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM50AO95807 157 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms