RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SSTR5P35346 364 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 MMD2Q8IY49 270 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 BEND2Q8NDZ0 799 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 EAF1Q96JC9 268 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-201ENST00000334504 TXNDC17Q9BRA2 123 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 ANKRD36CQ5JPF3 1778 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 UBE2L6O14933 153 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 LSM6P62312 80 aaKnown RBP8.53□□□□□ -1.04
COL4A6-201ENST00000334504 LRRC61Q9BV99 259 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 TMEM160Q9NX00 188 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 IGHV3OR15-7A0A075B7D8 119 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 A0A1W2PPC1 479 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 HPRT1P00492 218 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 C1QAP02745 245 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 ISG15P05161 165 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 NUDT10Q8NFP7 164 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 ZPLD1Q8TCW7 415 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 NUDT11Q96G61 164 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 PRSS27Q9BQR3 290 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 GPR132Q9UNW8 380 aa8.52□□□□□ -1.04
COL4A6-201ENST00000334504 IGLV3-16A0A075B6K0 115 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 CEACAM18A8MTB9 384 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 H0Y980 276 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 LINC00596Q86U02 117 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 MOGAT3Q86VF5 341 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 RTN4RQ9BZR6 473 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 TBL2Q9Y4P3 447 aaKnown RBP8.52□□□□□ -1.05
COL4A6-201ENST00000334504 LAMA4Q16363 1823 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 TRAV8-6A0A0B4J262 113 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 GZMHP20718 246 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 MRGPRX3Q96LB0 322 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 N4BP2Q86UW6 1770 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-201ENST00000334504 LIPT2A6NK58 231 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 FCGR2BP31994 310 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-201ENST00000334504 COL10A1Q03692 680 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
COL4A6-201ENST00000334504 TMEM222Q9H0R3 208 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 CRYBB3P26998 211 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 DLX6P56179 175 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 HIST1H1AQ02539 215 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-201ENST00000334504 MEIG1Q5JSS6 88 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 SLC25A40Q8TBP6 338 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 SRSF12Q8WXF0 261 aaKnown RBP8.52□□□□□ -1.05
COL4A6-201ENST00000334504 CHST5Q9GZS9 411 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 CRISPLD2Q9H0B8 497 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 PHIPQ8WWQ0 1821 aa8.52□□□□□ -1.05
COL4A6-201ENST00000334504 LILRA5A6NI73 299 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 GDF9O60383 454 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 ROM1Q03395 351 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 TNFRSF9Q07011 255 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 SMAGPQ0VAQ4 97 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 RND1Q92730 232 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 OR2H1Q9GZK4 316 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 ZNF430Q9H8G1 570 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-201ENST00000334504 CHODLQ9H9P2 273 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 CGB1A6NKQ9 187 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 SELENOHQ8IZQ5 122 aaKnown RBP8.51□□□□□ -1.05
COL4A6-201ENST00000334504 NFAM1Q8NET5 270 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-201ENST00000334504 C19orf67A6NJJ6 358 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 LINC00869P0C866 280 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 GGTLC2Q14390 218 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 ZIC1Q15915 447 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 CHRNA10Q9GZZ6 450 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 CARHSP1Q9Y2V2 147 aaKnown RBP8.51□□□□□ -1.05
COL4A6-201ENST00000334504 H3BUT2 72 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 EML2O95834 649 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 DNAL4O96015 105 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 BGLAPP02818 100 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 REG1BP48304 166 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 SRSF5Q13243 272 aaKnown RBP8.51□□□□□ -1.05
COL4A6-201ENST00000334504 RTP5Q14D33 572 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 FBLN7Q53RD9 439 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 FNDC4Q9H6D8 234 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-201ENST00000334504 HILPDAQ9Y5L2 63 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 PLCH1Q4KWH8 1693 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 TRBV5-3A0A0A0MS03 114 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 J3QT63 122 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 MPDU1O75352 247 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 PPP1R17O96001 155 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 HOXA5P20719 270 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 ID1P41134 155 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 EFNB1P98172 346 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 HIKESHIQ53FT3 197 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 ZNF488Q96MN9 340 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 TMUB1Q9BVT8 246 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 SSBP3Q9BWW4 388 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-201ENST00000334504 BTAF1O14981 1849 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 ANOS1P23352 680 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 TNFSF10P50591 281 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 TMEM78Q5T7P6 136 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 GPR146Q96CH1 333 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 ZNF414Q96IQ9 312 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 KCNS1Q96KK3 526 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 NDUFAF3Q9BU61 184 aa8.51□□□□□ -1.05
COL4A6-201ENST00000334504 SHROOM3Q8TF72 1996 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 C9orf50Q5SZB4 431 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 IMMP2LQ96T52 175 aa8.5□□□□□ -1.05
COL4A6-201ENST00000334504 SIGMAR1Q99720 223 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms