RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 AK6Q9Y3D8 172 aaKnown RBP13.89□□□□□ -0.19
HDDC3-201ENST00000330334 NBR2O15453 112 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 NDUFA3O95167 84 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 ZBTB25P24278 435 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 PPIFP30405 207 aaKnown RBP13.88□□□□□ -0.19
HDDC3-201ENST00000330334 MC5RP33032 325 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 P2RY14Q15391 338 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 RAB11BQ15907 218 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 C5orf64Q2M2E5 130 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 LIN54Q6MZP7 749 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 C4orf3Q8WVX3 66 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 OR51J1Q9H342 316 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 AK3Q9UIJ7 227 aa13.88□□□□□ -0.19
HDDC3-201ENST00000330334 WI2-2373I1.2A0A1W2PRP0 233 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 OR5H14A6NHG9 310 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 SLC2A2P11168 524 aaPredicted RBP13.87□□□□□ -0.19
HDDC3-201ENST00000330334 CALRP27797 417 aaKnown RBP13.87□□□□□ -0.19
HDDC3-201ENST00000330334 HOXD3P31249 432 aaPredicted RBP13.87□□□□□ -0.19
HDDC3-201ENST00000330334 TMEM50BP56557 158 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 FABP5Q01469 135 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 EDARADDQ8WWZ3 215 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 PTX4Q96A99 478 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 FAM3DQ96BQ1 224 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 RBMXL1Q96E39 390 aaKnown RBP13.87□□□□□ -0.19
HDDC3-201ENST00000330334 RNF5Q99942 180 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 C12orf4Q9NQ89 552 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 V9GY05 133 aa13.87□□□□□ -0.19
HDDC3-201ENST00000330334 IGHV7-81A0A0B4J1V7 117 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 LDLRAD4O15165 306 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 ST8SIA5O15466 376 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 IGLV1-40P01703 118 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 CT45A6P0DMU7 189 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 CT45A5P0DMU8 189 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 CT45A7P0DMV0 189 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 TBCEQ15813 527 aaPredicted RBP13.86□□□□□ -0.19
HDDC3-201ENST00000330334 C2orf76Q3KRA6 126 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 LCNL1Q6ZST4 164 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 OR56B1Q8NGI3 324 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 OR5AN1Q8NGI8 311 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 SETD6Q8TBK2 473 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 Q9N2K0 584 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 KIAA1456Q9P272 454 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 BLOC1S6Q9UL45 172 aa13.86□□□□□ -0.19
HDDC3-201ENST00000330334 COL7A1Q02388 2944 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 TRAV1-2A0A0B4J238 106 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 ERICH4A6NGS2 130 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 RAMP3O60896 148 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 RBBP9O75884 186 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 CNTFRP26992 372 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 CEACAM6P40199 344 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 CRIP2P52943 208 aaPredicted RBP13.85□□□□□ -0.19
HDDC3-201ENST00000330334 HLA-DRB3P79483 266 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 RUNX1Q01196 453 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 DCTN2Q13561 401 aaKnown RBP13.85□□□□□ -0.19
HDDC3-201ENST00000330334 FHL3Q13643 280 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 KIAA0141Q14154 515 aaPredicted RBP13.85□□□□□ -0.19
HDDC3-201ENST00000330334 ZNF660Q6AZW8 331 aaPredicted RBP13.85□□□□□ -0.19
HDDC3-201ENST00000330334 MINDY2Q8NBR6 621 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 OR5M8Q8NGP6 311 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 ARHGAP5-AS1Q96IT6 56 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 DUX3Q96PT4 197 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 PECRQ9BY49 303 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 C11orf54Q9H0W9 315 aaPredicted RBP13.85□□□□□ -0.19
HDDC3-201ENST00000330334 RAB22AQ9UL26 194 aa13.85□□□□□ -0.19
HDDC3-201ENST00000330334 H0YJW9 148 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 ATP6V0E1O15342 81 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 DENRO43583 198 aaKnown RBP13.84□□□□□ -0.19
HDDC3-201ENST00000330334 MAP2K4P45985 399 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 VEGFCP49767 419 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 RPL39P5Q59GN2 51 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 DEFB121Q5J5C9 76 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 PLAC9Q5JTB6 97 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 TMEM65Q6PI78 240 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 CD200R1LQ6Q8B3 271 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 IZUMO2Q6UXV1 221 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 ZNF367Q7RTV3 350 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 CMSS1Q9BQ75 279 aaKnown RBP13.84□□□□□ -0.19
HDDC3-201ENST00000330334 HDHD3Q9BSH5 251 aaPredicted RBP13.84□□□□□ -0.19
HDDC3-201ENST00000330334 TOLLIPQ9H0E2 274 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 PARP12Q9H0J9 701 aaKnown RBP13.84□□□□□ -0.19
HDDC3-201ENST00000330334 WSB1Q9Y6I7 421 aa13.84□□□□□ -0.19
HDDC3-201ENST00000330334 TRAV41A0A0B4J266 112 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 G3V318 75 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 RRHO14718 337 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 HSPA12AO43301 675 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 MRPS14O60783 128 aaKnown RBP13.83□□□□□ -0.2
HDDC3-201ENST00000330334 SCTP09683 121 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 GALP22466 123 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 CLDN12P56749 244 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 DGCR2P98153 550 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 DEFB136Q30KP8 78 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 FAM131AQ6UXB0 335 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 ZNF491Q8N8L2 437 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 ABHD14BQ96IU4 210 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 KLK15Q9H2R5 256 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 OR1A1Q9P1Q5 309 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 RAB26Q9ULW5 256 aa13.83□□□□□ -0.2
HDDC3-201ENST00000330334 VSIG4Q9Y279 399 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms