RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 LAMP3Q9UQV4 416 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 WIPI2Q9Y4P8 454 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 RBM7Q9Y580 266 aaKnown RBP16.12■□□□□ 0.17
RTN4-201ENST00000317610 RNF212BA8MTL3 300 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 H7BYZ3 331 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 SYNGR4O95473 234 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 P0C879 139 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 SPINK2P20155 84 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 FGF7P21781 194 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 GALR1P47211 349 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 APH1AQ96BI3 265 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 MEGF10Q96KG7 1140 aa16.12■□□□□ 0.17
RTN4-201ENST00000317610 B4E171 279 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 WDR1O75083 606 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 OR2H2O95918 312 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 TSPAN7P41732 249 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 SSPNQ14714 243 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 SPINK14Q6IE38 97 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 OR2M7Q8NG81 312 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 ACY3Q96HD9 319 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 FAM173AQ9BQD7 235 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 PARLQ9H300 379 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 MANBALQ9NQG1 85 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 TRAPPC2LQ9UL33 140 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 MBP02144 154 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 CELA3AP09093 270 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 CA6P23280 308 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 FAM3BP58499 235 aaPredicted RBP16.11■□□□□ 0.17
RTN4-201ENST00000317610 ERVK11-1P61568 191 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 OR8G2PQ6IF36 304 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 FAM180AQ6UWF9 173 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 PRR18Q8N4B5 295 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 TMEM170AQ8WVE7 144 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 RAB24Q969Q5 203 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 RPUSD4Q96CM3 377 aaKnown RBP16.11■□□□□ 0.17
RTN4-201ENST00000317610 OR5B12Q96R08 314 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 TMEM147Q9BVK8 224 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 DOCK10Q96BY6 2186 aa16.11■□□□□ 0.17
RTN4-201ENST00000317610 A0A1B0GV90 55 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 SIRPB1O00241 398 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 CLDN1O95832 211 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 HRASP01112 189 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 Q8IYB0 196 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 ANAPC16Q96DE5 110 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 SIT1Q9Y3P8 196 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 PMS2P5A8MQ11 134 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 PPP5D1E7EU14 171 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 CFIP05156 583 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 CEACAM6P40199 344 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 ZBTB34Q8NCN2 500 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 SLC25A22Q9H936 323 aa16.1■□□□□ 0.17
RTN4-201ENST00000317610 SLC31A2O15432 143 aa16.09■□□□□ 0.17
RTN4-201ENST00000317610 NEURL1O76050 574 aa16.09■□□□□ 0.17
RTN4-201ENST00000317610 HOXA6P31267 233 aa16.09■□□□□ 0.17
RTN4-201ENST00000317610 ERVS71-1P61550 626 aa16.09■□□□□ 0.17
RTN4-201ENST00000317610 LBHQ53QV2 105 aaPredicted RBP16.09■□□□□ 0.17
RTN4-201ENST00000317610 WDR86Q86TI4 376 aa16.09■□□□□ 0.17
RTN4-201ENST00000317610 NECAP1Q8NC96 275 aa16.09■□□□□ 0.17
RTN4-201ENST00000317610 CT55Q8WUE5 264 aa16.09■□□□□ 0.17
RTN4-201ENST00000317610 GP6Q9HCN6 339 aa16.09■□□□□ 0.17
RTN4-201ENST00000317610 XKRY2A2RUG3 117 aa16.08■□□□□ 0.17
RTN4-201ENST00000317610 GGCTO75223 188 aaKnown RBP16.08■□□□□ 0.17
RTN4-201ENST00000317610 TYMSP04818 313 aa16.08■□□□□ 0.17
RTN4-201ENST00000317610 EIF4EBP1Q13541 118 aaPredicted RBP16.08■□□□□ 0.17
RTN4-201ENST00000317610 ACTL10Q5JWF8 245 aa16.08■□□□□ 0.17
RTN4-201ENST00000317610 NOL4LQ96MY1 436 aaPredicted RBP16.08■□□□□ 0.17
RTN4-201ENST00000317610 RTL8AQ9BWD3 113 aa16.08■□□□□ 0.17
RTN4-201ENST00000317610 MRPL37Q9BZE1 423 aaKnown RBP16.08■□□□□ 0.17
RTN4-201ENST00000317610 B4GALT7Q9UBV7 327 aa16.08■□□□□ 0.17
RTN4-201ENST00000317610 ZNF146Q15072 292 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 MSMO1Q15800 293 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 IGFBP7Q16270 282 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 ZNF645Q8N7E2 425 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 OR10G9Q8NGN4 311 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 OR10G7Q8NGN6 311 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 UBALD1Q8TB05 177 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 C2orf88Q9BSF0 95 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 ELOVL1Q9BW60 279 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 MED12LQ86YW9 2145 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 ARHGAP21Q5T5U3 1957 aa16.08■□□□□ 0.16
RTN4-201ENST00000317610 A8MWP6 167 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 VENTXO95231 258 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 GCGP01275 180 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 PLA2G5P39877 138 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 TAS2R60P59551 318 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 P2RY6Q15077 328 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 VWC2Q2TAL6 325 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 ZNF66Q6ZN08 573 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 PCGF1Q9BSM1 259 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 COL27A1Q8IZC6 1860 aaPredicted RBP16.07■□□□□ 0.16
RTN4-201ENST00000317610 LRRC30A6NM36 301 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 MT-CO3P00414 261 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 TUBG1P23258 451 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 SRP14P37108 136 aaKnown RBP16.07■□□□□ 0.16
RTN4-201ENST00000317610 NUBP1P53384 320 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 DCAF12Q5T6F0 453 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 TIPARPQ7Z3E1 657 aaKnown RBP16.07■□□□□ 0.16
RTN4-201ENST00000317610 NUFIP2Q7Z417 695 aaKnown RBP16.07■□□□□ 0.16
RTN4-201ENST00000317610 SCCPDHQ8NBX0 429 aa16.07■□□□□ 0.16
RTN4-201ENST00000317610 OR4F5Q8NH21 305 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms