RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PAQR5Q9NXK6 330 aaPredicted RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 OR5V1Q9UGF6 321 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 MRPS18BQ9Y676 258 aaKnown RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 LHFPL6Q9Y693 200 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 CACNG2Q9Y698 323 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 COL27A1Q8IZC6 1860 aaPredicted RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 CPAMD8Q8IZJ3 1885 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 MPDZO75970 2070 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 DNAH14Q0VDD8 3507 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 LOC107986453A0A1B0GWG9 222 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 A0A1W2PPE3 182 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 NAP1L6A6NFF2 107 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 INMT-MINDY4F8WBC2 141 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 H3BSH0 61 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 RER1O15258 196 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 NDUFS6O75380 124 aaKnown RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 CRTAPO75718 401 aaPredicted RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 CCNKO75909 580 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 GIG44P09565 113 aaPredicted RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 RNF224P0DH78 156 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 TRAPPC2P0DI81 140 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 TRAPPC2BP0DI82 140 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 IGFBP3P17936 291 aaPredicted RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 RAB3AP20336 220 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 HLA-DMAP28067 261 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 SLC6A1P30531 599 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 CLDN12P56749 244 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 RAB25P57735 213 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 PCBD1P61457 104 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 ECH1Q13011 328 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 GPR176Q14439 515 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 SLC36A2Q495M3 483 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 GLYATL3Q5SZD4 288 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 PGAP1Q75T13 922 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 WDFY1Q8IWB7 410 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 JAGN1Q8N5M9 183 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 ZNF283Q8N7M2 679 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 ZIC4Q8N9L1 334 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 OR51D1Q8NGF3 324 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 SMIM4Q8WVI0 70 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 DEDD2Q8WXF8 326 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 YIPF5Q969M3 257 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 FAM3DQ96BQ1 224 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 FGGYQ96C11 551 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 SLC25A38Q96DW6 304 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 SIGLEC12Q96PQ1 595 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 MARVELD1Q9BSK0 173 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 PARD6GQ9BYG4 376 aaPredicted RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 TTTY12Q9BZ98 90 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 EXO5Q9H790 373 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 TMEM138Q9NPI0 162 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 FAM206AQ9NX38 181 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 TAS2R8Q9NYW2 309 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 NUFIP1Q9UHK0 495 aaKnown RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 FBXL3Q9UKT7 428 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 MCTS1Q9ULC4 181 aaKnown RBP3.01□□□□□ -1.93
SMCO3-201ENST00000316048 FLVCR1Q9Y5Y0 555 aa3.01□□□□□ -1.93
SMCO3-201ENST00000316048 PRUNE2Q8WUY3 3088 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 IGKV1D-8A0A087WSZ0 117 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 A0A0A6YYH2 397 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 A0A0G2JMM0 328 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 SPAARA0A1B0GVQ0 90 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 A0A1W2PPB8 328 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 A0A1W2PRS3 328 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 A6NJ64 397 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 ARGFXA6NJG6 315 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 KIR3DP1A8MWS1 328 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 F5H5K5 113 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 MRPL33O75394 65 aaKnown RBP3□□□□□ -1.93
SMCO3-201ENST00000316048 FARS2O95363 451 aaKnown RBP3□□□□□ -1.93
SMCO3-201ENST00000316048 ACTL6AO96019 429 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 TTRP02766 147 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 CST2P09228 141 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 CD3GP09693 182 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 ACSM4P0C7M7 580 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 CD37P11049 281 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 LIPCP11150 499 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 IGLL1P15814 213 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 GATA1P15976 413 aaPredicted RBP3□□□□□ -1.93
SMCO3-201ENST00000316048 CSRP1P21291 193 aaKnown RBP3□□□□□ -1.93
SMCO3-201ENST00000316048 CDK2P24941 298 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 FAUP35544 74 aaKnown RBP3□□□□□ -1.93
SMCO3-201ENST00000316048 DDOSTP39656 456 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 CX3CR1P49238 355 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 ZNF121P58317 390 aaPredicted RBP3□□□□□ -1.93
SMCO3-201ENST00000316048 HIST1H3AP68431 136 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 ARG2P78540 354 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 SSBP1Q04837 148 aaKnown RBP3□□□□□ -1.93
SMCO3-201ENST00000316048 SCRN3Q0VDG4 424 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 HIKESHIQ53FT3 197 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 C1orf100Q5SVJ3 147 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 HIST2H3PS2Q5TEC6 136 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 C2orf66Q6UXQ4 117 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 HIST2H3AQ71DI3 136 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 H2BFWTQ7Z2G1 175 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 BIVMQ86UB2 503 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 LRRC18Q8N456 261 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 SLC22A24Q8N4F4 322 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 OR1M1Q8NGA1 313 aa3□□□□□ -1.93
SMCO3-201ENST00000316048 KCNG3Q8TAE7 436 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms