RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OR2S2Q9NQN1 319 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 PLEKHJ1Q9NW61 149 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 KLRF1Q9NZS2 232 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 GSKIPQ9P0R6 139 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF319Q9P2F9 582 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 CLCF1Q9UBD9 225 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 BOKQ9UMX3 212 aaPredicted RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 VDAC3Q9Y277 283 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM96BQ9Y3D0 163 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 TMED3Q9Y3Q3 217 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 A0A087WWC5 75 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 C7orf77A4D0Y5 90 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 CXorf65A6NEN9 183 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 GJE1A6NN92 205 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 H3BML4 177 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 M0R135 149 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 SDCBPO00560 298 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ST8SIA3O43173 380 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 CRLF1O75462 422 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 TRAPPC6AO75865 159 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 FARS2O95363 451 aaKnown RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 PLAUP00749 431 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 MBPP02686 304 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 S100A6P06703 90 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ACAA1P09110 424 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 CST2P09228 141 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 WNT2P09544 360 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 SLC2A1P11166 492 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 CRYGSP22914 178 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 S100PP25815 95 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 CHATP28329 748 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 CD80P33681 288 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 LHX2P50458 406 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 B3GALT5-AS1P59052 145 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 RND3P61587 244 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF266Q14584 549 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 RAB35Q15286 201 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 RSU1Q15404 277 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 UBE2V2Q15819 145 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 GUK1Q16774 197 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 RSPO1Q2MKA7 263 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ABCA11PQ4W5N1 156 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 DNLZQ5SXM8 178 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM42Q69YG0 159 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 OR2A2Q6IF42 318 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 VWA1Q6PCB0 445 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF474Q6S9Z5 364 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 DPPA3Q6W0C5 159 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 RNF144BQ7Z419 303 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM123Q8N131 208 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 WDSUB1Q8N9V3 476 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 Q8NFD4 153 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 TCTEX1D2Q8WW35 142 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ROBO4Q8WZ75 1007 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 DDB2Q92466 427 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 MRPL24Q96A35 216 aaKnown RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 NABP1Q96AH0 204 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 MOB3AQ96BX8 217 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 STARD4Q96DR4 205 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 DNAJA3Q96EY1 480 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF799Q96GE5 643 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 SPACA5Q96QH8 159 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 CMSS1Q9BQ75 279 aaKnown RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ADAT1Q9BUB4 502 aaKnown RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM231Q9H6L2 316 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 UBTD1Q9HAC8 227 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF286AQ9HBT8 521 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 C19orf12Q9NSK7 152 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 ZMAT5Q9UDW3 170 aaKnown RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 MCTS1Q9ULC4 181 aaKnown RBP4.12□□□□□ -1.75
CKS1B-201ENST00000308987 PIGLQ9Y2B2 252 aa4.12□□□□□ -1.75
CKS1B-201ENST00000308987 A0A1W2PP11 408 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 PCP4L1A6NKN8 68 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 MARCH11A6NNE9 402 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 K7N7A8 449 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 AP4M1O00189 453 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 HSPA12AO43301 675 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 KCNAB3O43448 404 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 TGOLN2O43493 480 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 ZIC3O60481 467 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SMPD2O60906 423 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 PDCD6O75340 191 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 PITX3O75364 302 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 NDUFS6O75380 124 aaKnown RBP4.11□□□□□ -1.75
CKS1B-201ENST00000308987 EIF3GO75821 320 aaKnown RBP eCLIP4.11□□□□□ -1.752e-6■■■■■ 29.6
CKS1B-201ENST00000308987 GOSR1O95249 250 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 CGAP01215 116 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 IFNA17P01571 189 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 IGHV2-5P01817 119 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 HBE1P02100 147 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 ELANEP08246 267 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 OR8U9P0C7N5 309 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM225BP0DP42 221 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF44P15621 663 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 PAX1P15863 534 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 RAB5AP20339 215 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SERPINA2P20848 420 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 NFYBP25208 207 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 CDAP32320 146 aa4.11□□□□□ -1.75
CKS1B-201ENST00000308987 SFTPDP35247 375 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms