RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 AKR1D1P51857 326 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 MSMPQ1L6U9 139 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 SLC35E4Q6ICL7 350 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 VSIRQ9H7M9 311 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 RIF1Q5UIP0 2472 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 OR5H1A6NKK0 313 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 ATXN7O15265 892 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 CGAP01215 116 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 IGLV1-44P01699 117 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 ACAA1P09110 424 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 CEACAM1P13688 526 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 RPL35P42766 123 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 ZNF83P51522 516 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 EDDM3AQ14507 147 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 FAM180AQ6UWF9 173 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 LRRC29Q8WV35 223 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 NINJ1Q92982 152 aa15.38■□□□□ 0.05
SHKBP1-201ENST00000291842 ZNF292O60281 2723 aa15.37■□□□□ 0.05
SHKBP1-201ENST00000291842 A0A1W2PPH5 198 aa15.37■□□□□ 0.05
SHKBP1-201ENST00000291842 ZADH2Q8N4Q0 377 aa15.37■□□□□ 0.05
SHKBP1-201ENST00000291842 CD177Q8N6Q3 437 aa15.37■□□□□ 0.05
SHKBP1-201ENST00000291842 HIST1H2BAQ96A08 127 aa15.37■□□□□ 0.05
SHKBP1-201ENST00000291842 ZNF318Q5VUA4 2279 aa15.37■□□□□ 0.05
SHKBP1-201ENST00000291842 PIGBOS1A0A0B4J2F0 54 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 C17orf98A8MV24 154 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 EIF3GO75821 320 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 PLA2G5P39877 138 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 CD200P41217 278 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 LILRB2Q8N423 598 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 SCGB1C1Q8TD33 95 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 PTPRBP23467 1997 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 A0A1B0GW64 132 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 A0A1W2PPE2 198 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 NDUFA2O43678 99 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 S1PR2O95136 353 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 BRWD1-AS2P59051 145 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 UBE2KP61086 200 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 SMIM21Q3B7S5 101 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 SPRNQ5BIV9 151 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 OR8G2PQ6IF36 304 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 ZNF525Q8N782 197 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 C15orf54Q8N8G6 183 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 TCTEX1D2Q8WW35 142 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 KIAA1456Q9P272 454 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 ZFHX2Q9C0A1 2572 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 DOCK11Q5JSL3 2073 aa15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 MAP1BP46821 2468 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-201ENST00000291842 RNF212BA8MTL3 300 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 EGR1P18146 543 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 TLE4Q04727 773 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 RBKSQ9H477 322 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 MMP24Q9Y5R2 645 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 ICE1Q9Y2F5 2266 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 IGHV3OR15-7A0A075B7D8 119 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 ST8SIA5O15466 376 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 CLDN1O95832 211 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 RPS16P62249 146 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 ICAM4Q14773 271 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 MBNL2Q5VZF2 373 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 VHLLQ6RSH7 139 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 RPRMQ9NS64 109 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 SLC25A15Q9Y619 301 aa15.35■□□□□ 0.05
SHKBP1-201ENST00000291842 ZNF891A8MT65 544 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 M0R1B8 84 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 IGHV3-13P01766 116 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 IGHV3-7P01780 117 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 SP5Q6BEB4 398 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 FAM24BQ8N5W8 94 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 PRR7Q8TB68 274 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 PSG11Q9UQ72 335 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 hCG_1809904A0A1W2PP81 198 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 A0A1W2PR64 198 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 A0A1W2PRV1 198 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 SCAF4O95104 1147 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 CD55P08174 381 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 SRP19P09132 144 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 FGF8P55075 233 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 TNFRSF9Q07011 255 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 HABP2Q14520 560 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 P2RY6Q15077 328 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 SPINK9Q5DT21 86 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 LCN15Q6UWW0 184 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 CYB561D1Q8N8Q1 229 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 CLDND2Q8NHS1 167 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 S100PBPQ96BU1 408 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 OR4C12Q96R67 309 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 CLN8Q9UBY8 286 aa15.34■□□□□ 0.05
SHKBP1-201ENST00000291842 BTBD17A6NE02 478 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 CEACAM4O75871 244 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 PRDX2P32119 198 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 EIF4EBP1Q13541 118 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 Q3ZCU0 254 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 SSX7Q7RTT5 188 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 LINC00518Q8N0U6 118 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 CEP250Q9BV73 2442 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 GNG13Q9P2W3 67 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 UBE2L5PA0A1B0GUS4 154 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 ODAMA1E959 279 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 LINC00473A8K010 186 aa15.33■□□□□ 0.04
SHKBP1-201ENST00000291842 K7EM74 188 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms