RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 LINC00469Q8N7U9 141 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 SLC26A10Q8NG04 563 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 PAM16Q9Y3D7 125 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 LYNX1G3V0Z9 82 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 LYNX1P0DP58 116 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 PRNDQ9UKY0 176 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 NAA60Q9H7X0 242 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 B9A039 149 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 EIF4E3Q8N5X7 224 aaKnown RBP13.71□□□□□ -0.21
SHANK3-201ENST00000262795 PPP1R17O96001 155 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 SNRPD3P62318 126 aaKnown RBP13.71□□□□□ -0.21
SHANK3-201ENST00000262795 WFDC12Q8WWY7 111 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 MFNGO00587 321 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 ZIC3O60481 467 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 STAG3L2P0CL84 134 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 HLA-DRB3P79483 266 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 GPX1P07203 203 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 CRISP2P16562 243 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 TMEM128Q5BJH2 165 aa13.71□□□□□ -0.21
SHANK3-201ENST00000262795 MFSD2BA6NFX1 497 aa13.71□□□□□ -0.22
SHANK3-201ENST00000262795 FCGR3AP08637 254 aa13.71□□□□□ -0.22
SHANK3-201ENST00000262795 ZNF415Q09FC8 603 aa13.71□□□□□ -0.22
SHANK3-201ENST00000262795 FOXC2Q99958 501 aa13.71□□□□□ -0.22
SHANK3-201ENST00000262795 ZNF256Q9Y2P7 627 aaPredicted RBP13.71□□□□□ -0.22
SHANK3-201ENST00000262795 DUX3Q96PT4 197 aa13.71□□□□□ -0.22
SHANK3-201ENST00000262795 AURKAIP1Q9NWT8 199 aaPredicted RBP13.71□□□□□ -0.22
SHANK3-201ENST00000262795 ZFPL1O95159 310 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 CST4P01036 141 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 HBZP02008 142 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 SRSF9Q13242 221 aaKnown RBP eCLIP13.7□□□□□ -0.22
SHANK3-201ENST00000262795 TBR1Q16650 682 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 OIT3Q8WWZ8 545 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 TSPAN13O95857 204 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 ZNF735P0CB33 412 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 CACNG7P62955 275 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 HIST1H1AQ02539 215 aaPredicted RBP13.7□□□□□ -0.22
SHANK3-201ENST00000262795 LRRC75BQ2VPJ9 315 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 ST6GAL2Q96JF0 529 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 ELOVL5Q9NYP7 299 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 TECRQ9NZ01 308 aaKnown RBP13.7□□□□□ -0.22
SHANK3-201ENST00000262795 CDC42EP2O14613 210 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 SPCS3P61009 180 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 VKORC1L1Q8N0U8 176 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 LHFPL5Q8TAF8 219 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 CEACAM18A8MTB9 384 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 C1QAP02745 245 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 CRYBB2P43320 205 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 RBM11P57052 281 aaKnown RBP13.7□□□□□ -0.22
SHANK3-201ENST00000262795 PLP1P60201 277 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 ATG4DQ86TL0 474 aaPredicted RBP13.7□□□□□ -0.22
SHANK3-201ENST00000262795 ZNF502Q8TBZ5 544 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 RAB37Q96AX2 223 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 EEF1AKMT3Q96AZ1 226 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 ASPDHA6ND91 283 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 SRD5A1P18405 259 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 FXYD3Q14802 87 aa13.7□□□□□ -0.22
SHANK3-201ENST00000262795 TPRP12270 2363 aaKnown RBP13.69□□□□□ -0.22
SHANK3-201ENST00000262795 CD24P25063 80 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 TCF20Q9UGU0 1960 aaKnown RBP13.69□□□□□ -0.22
SHANK3-201ENST00000262795 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 IGLV3-16A0A075B6K0 115 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 FAM157CP0CG43 387 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 LINC01587Q99440 93 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 CALYQ9NYX4 217 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 ARRDC5A6NEK1 342 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 STHQ8IWL8 128 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 DUSP21Q9H596 190 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 HSF4Q9ULV5 492 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 A0A1W2PQD3 144 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 NPFFO15130 113 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 FAM162BQ5T6X4 162 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 MYOZ3Q8TDC0 251 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 MAP1LC3B2A6NCE7 125 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 CXCL3P19876 107 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 HERVK_113P61574 105 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 MAP1LC3BQ9GZQ8 125 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 IDI2-AS1Q9NZ38 188 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 A0A1W2PPV9 198 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 FCN1O00602 326 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 SSTR5P35346 364 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 KLF14Q8TD94 323 aaPredicted RBP13.69□□□□□ -0.22
SHANK3-201ENST00000262795 VGLL1Q99990 258 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 PHLDA3Q9Y5J5 127 aa13.69□□□□□ -0.22
SHANK3-201ENST00000262795 IGKV1D-33P01593 117 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 IGKV1-33P01594 117 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 OR11H7Q8NGC8 314 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 TMEM174Q8WUU8 243 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 NTNG2Q96CW9 530 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 LSM6P62312 80 aaKnown RBP13.68□□□□□ -0.22
SHANK3-201ENST00000262795 CD69Q07108 199 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 DHRS2Q13268 280 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 FAM209BQ5JX69 171 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.68□□□□□ -0.22
SHANK3-201ENST00000262795 WDR25Q64LD2 544 aaPredicted RBP13.68□□□□□ -0.22
SHANK3-201ENST00000262795 RAB40CQ96S21 281 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 RBM38Q9H0Z9 239 aaKnown RBP13.68□□□□□ -0.22
SHANK3-201ENST00000262795 TRGV2A0A075B6R0 118 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 PSCAO43653 123 aa13.68□□□□□ -0.22
SHANK3-201ENST00000262795 OR2H2O95918 312 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms