RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 OR4F5Q8NH21 305 aa15.22■□□□□ 0.03
TRAF4-201ENST00000262395 TAF15Q92804 592 aaKnown RBP eCLIP15.22■□□□□ 0.03
TRAF4-201ENST00000262395 OR4F4Q96R69 305 aa15.22■□□□□ 0.03
TRAF4-201ENST00000262395 HES7Q9BYE0 225 aa15.22■□□□□ 0.03
TRAF4-201ENST00000262395 TMEM242Q9NWH2 141 aa15.22■□□□□ 0.03
TRAF4-201ENST00000262395 USF3Q68DE3 2245 aa15.22■□□□□ 0.03
TRAF4-201ENST00000262395 COX5BP10606 129 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 SELEP16581 610 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 GALR1P47211 349 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 MEF2BQ02080 365 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-201ENST00000262395 ZNF664Q8N3J9 261 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 OR1P1Q8NH06 330 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 HLA-CQ95604 372 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 TRAPPC2LQ9UL33 140 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 PATE3B3GLJ2 98 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 SOX15O60248 233 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 KRASP01116 189 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 PFN1P07737 140 aaKnown RBP15.21■□□□□ 0.03
TRAF4-201ENST00000262395 EGR1P18146 543 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 IDH3GP51553 393 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-201ENST00000262395 RPL23P62829 140 aaKnown RBP15.21■□□□□ 0.03
TRAF4-201ENST00000262395 RNPS1Q15287 305 aaKnown RBP15.21■□□□□ 0.03
TRAF4-201ENST00000262395 NAT8Q9UHE5 227 aa15.21■□□□□ 0.03
TRAF4-201ENST00000262395 H7BYZ3 331 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 ZXDAP98168 799 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 CLN8Q9UBY8 286 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 FUT9Q9Y231 359 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 DOCK10Q96BY6 2186 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 APOBEC3DQ96AK3 386 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-201ENST00000262395 MRPL37Q9BZE1 423 aaKnown RBP15.2■□□□□ 0.02
TRAF4-201ENST00000262395 HIPK2Q9H2X6 1198 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 PARLQ9H300 379 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 SRD5A3Q9H8P0 318 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 FAM166BA8MTA8 275 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 PPP5D1E7EU14 171 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 RAMP3O60896 148 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 IFNA1P01562 189 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 CEACAM6P40199 344 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 ZNF816Q0VGE8 651 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-201ENST00000262395 SRSF7Q16629 238 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAF4-201ENST00000262395 FGFRL1Q8N441 504 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 ZNF808Q8N4W9 903 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-201ENST00000262395 OR5A2Q8NGI9 324 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 OR5P3Q8WZ94 311 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 TP53TG5Q9Y2B4 290 aa15.2■□□□□ 0.02
TRAF4-201ENST00000262395 A0A1B0GWJ7 208 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 CEBPDP49716 269 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-201ENST00000262395 SAXO1Q8IYX7 474 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 P2RX4Q99571 388 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 PSMG3Q9BT73 122 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-201ENST00000262395 TMEM9BQ9NQ34 198 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 COL6A3P12111 3177 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 EREGO14944 169 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 G6PCP35575 357 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 SERF2P84101 59 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 JOSD1Q15040 202 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-201ENST00000262395 OR5B12Q96R08 314 aa15.19■□□□□ 0.02
TRAF4-201ENST00000262395 ANKRD30BLA7E2S9 258 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 A8MWP6 167 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 CHRNA7P36544 502 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 FAM3BP58499 235 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-201ENST00000262395 LINC00205P59089 165 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 NUTF2P61970 127 aaKnown RBP15.18■□□□□ 0.02
TRAF4-201ENST00000262395 PPP1R32Q7Z5V6 425 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 DRAM1Q8N682 238 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 OR51G1Q8NGK1 321 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 THOC3Q96J01 351 aaKnown RBP15.18■□□□□ 0.02
TRAF4-201ENST00000262395 GFRA1P56159 465 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 GNB2P62879 340 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 TFF3Q07654 80 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 CTDSP1Q9GZU7 261 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 C12orf49Q9H741 205 aa15.18■□□□□ 0.02
TRAF4-201ENST00000262395 A0A1B0GUS0 222 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 C1QTNF9BB2RNN3 333 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 PAGE4O60829 102 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 KBTBD11O94819 623 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 CYB561P49447 251 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 PMS2P11Q13670 270 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 CYP2G1PQ6ZSU1 146 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 ZDHHC16Q969W1 377 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 TFF1P04155 84 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 WNT5AP41221 380 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 PSMB3P49720 205 aa15.17■□□□□ 0.02
TRAF4-201ENST00000262395 LBHQ53QV2 105 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-201ENST00000262395 LSM10Q969L4 123 aaKnown RBP15.17■□□□□ 0.02
TRAF4-201ENST00000262395 RIMS4Q9H426 269 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-201ENST00000262395 UBE2ZQ9H832 354 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-201ENST00000262395 CRYAAP02489 173 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 SLC25A6P12236 298 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 FGF7P21781 194 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 OR10G9Q8NGN4 311 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 OR10G7Q8NGN6 311 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 POM121L2Q96KW2 1035 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 OR2H2O95918 312 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 GNG3P63215 75 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 OR5R1Q8NH85 324 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 RBMXL2O75526 392 aaKnown RBP15.16■□□□□ 0.02
TRAF4-201ENST00000262395 SFTPCP11686 197 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 UBE2G2P60604 165 aa15.16■□□□□ 0.02
TRAF4-201ENST00000262395 FFAR4Q5NUL3 377 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms