RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 AQP3Q92482 292 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 SERTM2A0A1B0GWG4 89 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 MAP1LC3B2A6NCE7 125 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 UBE2L3P68036 154 aaKnown RBP11.91□□□□□ -0.5
CDH1-201ENST00000261769 ZNF273Q14593 569 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 RNFT1Q5M7Z0 435 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 SLC35E4Q6ICL7 350 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 ZNF645Q8N7E2 425 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 OR10G4Q8NGN3 311 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 OR10G9Q8NGN4 311 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 OR10G7Q8NGN6 311 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 JMJD8Q96S16 334 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 MAP1LC3BQ9GZQ8 125 aa11.91□□□□□ -0.5
CDH1-201ENST00000261769 IGKV3D-15A0A087WSY6 115 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 DSCR9P59020 149 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 FAM90A1Q86YD7 464 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 PDPNQ86YL7 162 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 MDS2Q8NDY4 140 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 REPIN1Q9BWE0 567 aaKnown RBP11.9□□□□□ -0.5
CDH1-201ENST00000261769 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 KCNK7Q9Y2U2 307 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 ZNF154Q13106 437 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 BLNKQ8WV28 456 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 STARD4Q96DR4 205 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 CTDSP1Q9GZU7 261 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 MIXL1Q9H2W2 232 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 SCTP09683 121 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 HLA-GP17693 338 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 Q96M66 194 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 OR51I2Q9H344 312 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 GAB2Q9UQC2 676 aa11.9□□□□□ -0.5
CDH1-201ENST00000261769 A0A1W2PS18 150 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 ZNF716A6NP11 495 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 NPIPB7O75200 414 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 HOXA4Q00056 320 aaPredicted RBP11.89□□□□□ -0.51
CDH1-201ENST00000261769 EXOSC2Q13868 293 aaKnown RBP11.89□□□□□ -0.51
CDH1-201ENST00000261769 KLF9Q13886 244 aaPredicted RBP11.89□□□□□ -0.51
CDH1-201ENST00000261769 FAM162BQ5T6X4 162 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 ROS1P08922 2347 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 IQCF6A8MYZ5 107 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 TM4SF5O14894 197 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 GLIPR1P48060 266 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 IGSF11Q5DX21 431 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 ZNRF4Q8WWF5 429 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 LMX1BO60663 402 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 CDKN1AP38936 164 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 LY6EQ16553 131 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 UNQ9370/PRO34162Q6UXP9 181 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 MESP1Q9BRJ9 268 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 MRPL13Q9BYD1 178 aaKnown RBP11.89□□□□□ -0.51
CDH1-201ENST00000261769 RBM38Q9H0Z9 239 aaKnown RBP11.89□□□□□ -0.51
CDH1-201ENST00000261769 GALR1P47211 349 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 MEF2CQ06413 473 aaPredicted RBP11.89□□□□□ -0.51
CDH1-201ENST00000261769 C20orf204Q6ZNR8 217 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 LRRC75AQ8NAA5 344 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 OR4C13Q8NGP0 309 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 LURAP1Q96LR2 239 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 DCTN5Q9BTE1 182 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 DPM3Q9P2X0 92 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 ANK1P16157 1881 aa11.89□□□□□ -0.51
CDH1-201ENST00000261769 H0Y980 276 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 HAX1O00165 279 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 USF1P22415 310 aaPredicted RBP11.88□□□□□ -0.51
CDH1-201ENST00000261769 SULT1A1P50225 295 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 H3F3AP84243 136 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 MIDNQ504T8 468 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 ACP7Q6ZNF0 438 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 POC1AQ8NBT0 407 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 RELL2Q8NC24 303 aaPredicted RBP11.88□□□□□ -0.51
CDH1-201ENST00000261769 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 NPAS1Q99742 590 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 FBXL17Q9UF56 701 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 U3KQ87 197 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 APELAP0DMC3 54 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 SPCS3P61009 180 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 CENPVQ7Z7K6 275 aaPredicted RBP11.88□□□□□ -0.51
CDH1-201ENST00000261769 TRIM77I1YAP6 450 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 ERVH48-1M5A8F1 160 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 TMEM50BP56557 158 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 LCN2P80188 198 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 TEPPQ6URK8 271 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 SSX7Q7RTT5 188 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 LYZL2Q7Z4W2 148 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 SLC24A4Q8NFF2 622 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 MMP24Q9Y5R2 645 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 IGKV3-7A0A075B6H7 116 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
CDH1-201ENST00000261769 ERVS71-1P61550 626 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 ZNF385CQ66K41 422 aaPredicted RBP11.88□□□□□ -0.51
CDH1-201ENST00000261769 ZNRF1Q8ND25 227 aa11.88□□□□□ -0.51
CDH1-201ENST00000261769 Q0VFX4 171 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 FAM106AQ4KMX7 169 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 CD200R1LQ6Q8B3 271 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 OR4A5Q8NH83 315 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 FBLIM1Q8WUP2 373 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
CDH1-201ENST00000261769 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms