RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RPRMQ9NS64 109 aa12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 TP53TG5Q9Y2B4 290 aa12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 NBASA2RRP1 2371 aa12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 IGKV1-6A0A0C4DH72 117 aa12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 RPP30P78346 268 aaKnown RBP12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 PSG7Q13046 419 aa12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 CIB3Q96Q77 187 aaPredicted RBP12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 OR4C12Q96R67 309 aa12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 HIPK2Q9H2X6 1198 aa12.69□□□□□ -0.38
UBE2D4-201ENST00000222402 COL4A2P08572 1712 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 ZNF737O75373 536 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 OR8U8P0C7N1 319 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 FFAR4Q5NUL3 377 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 TAAR6Q96RI8 345 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 ACTR3CQ9C0K3 210 aaPredicted RBP12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 SMDT1Q9H4I9 107 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 SPRR3Q9UBC9 169 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 BMP5P22003 454 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 KHDC3LQ587J8 217 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 NCR3LG1Q68D85 454 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 ZDHHC8Q9ULC8 765 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 PKDREJQ9NTG1 2253 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 H7BYZ3 331 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 AP4M1O00189 453 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 NMSQ5H8A3 153 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 DTD1Q8TEA8 209 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 LAMP3Q9UQV4 416 aa12.68□□□□□ -0.38
UBE2D4-201ENST00000222402 COLCA2A8K830 154 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 GABRA6Q16445 453 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 PEAR1Q5VY43 1037 aaPredicted RBP12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 ZNF324BQ6AW86 544 aaPredicted RBP12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 FDCSPQ8NFU4 85 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 IGHV1-2P23083 117 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 ZNF610Q8N9Z0 462 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 ARV1Q9H2C2 271 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 IFT22Q9H7X7 185 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 TMEM210A6NLX4 147 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 TFF1P04155 84 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 UBE2G2P60604 165 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 COL10A1Q03692 680 aa12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 LILRB1Q8NHL6 650 aaPredicted RBP12.67□□□□□ -0.38
UBE2D4-201ENST00000222402 CLDN34H7C241 214 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 OR10G4Q8NGN3 311 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 OR10G9Q8NGN4 311 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 OR10G7Q8NGN6 311 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 LOXL4Q96JB6 756 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 USF3Q68DE3 2245 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 A0A0G2JRQ6 117 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 HSPB1P04792 205 aaKnown RBP12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 BCL2P10415 239 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 MPV17P39210 176 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 VWA1Q6PCB0 445 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 GFOD1Q9NXC2 390 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 TNFSF4P23510 183 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 GLIPR1P48060 266 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 RAB31Q13636 194 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 ZNF343Q6P1L6 599 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 FRZBQ92765 325 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 LSM10Q969L4 123 aaKnown RBP12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 S1PR3Q99500 378 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 TMEM147Q9BVK8 224 aa12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 FGF23Q9GZV9 251 aaPredicted RBP12.66□□□□□ -0.38
UBE2D4-201ENST00000222402 MBP02144 154 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 EIF2S3P41091 472 aaKnown RBP12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 TNFSF10P50591 281 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 RNF212Q495C1 297 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 OR8G5Q8NG78 346 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 GTF3AQ92664 365 aaKnown RBP12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 RBKSQ9H477 322 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 C12orf77C9JDV5 145 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 SSTR5P35346 364 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 FAM210BQ96KR6 192 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 OPN3Q9H1Y3 402 aaPredicted RBP12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 COL5A1P20908 1838 aaPredicted RBP12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 TMEM50AO95807 157 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 RNFT1Q5M7Z0 435 aa12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 TAF15Q92804 592 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBE2D4-201ENST00000222402 IGHV3OR15-7A0A075B7D8 119 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 S1PR2O95136 353 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 SRP19P09132 144 aaKnown RBP12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 SLC25A6P12236 298 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 TDGF1P13385 188 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 Q6ZT83 130 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 ZNF645Q8N7E2 425 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 R3HDM4Q96D70 268 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 TOLLIPQ9H0E2 274 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 RAB9BQ9NP90 201 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 VAX2Q9UIW0 290 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 SPTBN5Q9NRC6 3674 aaKnown RBP12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 A0A1W2PPQ1 181 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 PGA5P0DJD9 388 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 SERF2P84101 59 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 TNFRSF9Q07011 255 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 HABP2Q14520 560 aaPredicted RBP12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 ACOT6Q3I5F7 207 aaPredicted RBP12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 TMEM41BQ5BJD5 291 aa12.64□□□□□ -0.39
UBE2D4-201ENST00000222402 C10orf91Q5T1B1 145 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms