RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 CD3EP07766 207 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 RPL30P62888 115 aaKnown RBP14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 EIF5AP63241 154 aaKnown RBP14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 LY6DQ14210 128 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 Q6ZRM9 215 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 EGLN1Q9GZT9 426 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 NDRG3Q9UGV2 375 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 JPT1Q9UK76 154 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 PSG11Q9UQ72 335 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 TEX46H3BTG2 121 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 ST8SIA5O15466 376 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 FGF16O43320 207 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 CDSNQ15517 529 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 IZUMO4Q1ZYL8 232 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 MORN2Q502X0 79 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 RNASE11Q8TAA1 199 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 MARVELD3Q96A59 401 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 FAM234AQ9H0X4 552 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 SAP30LQ9HAJ7 183 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 CALYQ9NYX4 217 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 PIEZO1Q92508 2521 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 JTBO76095 146 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 PVALBP20472 110 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 LPAR6P43657 344 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 LOXL3P58215 753 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 BTNL3Q6UXE8 466 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 OR2C3Q8N628 320 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 FAM216BQ8N7L0 139 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 EDARADDQ8WWZ3 215 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 WFDC1Q9HC57 220 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 GNG12Q9UBI6 72 aa14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 DIDO1Q9BTC0 2240 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-201ENST00000216840 FAM24AA6NFZ4 105 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 KIAA1324LA8MWY0 1029 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 SIGLEC5O15389 551 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 YPEL1O60688 119 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 RAMP3O60896 148 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 NXPH3O95157 252 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 MMP9P14780 707 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 APOBEC3AP31941 199 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 NHLH2Q02577 135 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 C17orf58Q2M2W7 97 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 MST1LQ2TV78 715 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 YPEL2Q96QA6 119 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 CACNG5Q9UF02 275 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 RNF115Q9Y4L5 304 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 ARFGEF3Q5TH69 2177 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 PKDREJQ9NTG1 2253 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 PLAUP00749 431 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 FAM157CP0CG43 387 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 SFTPCP11686 197 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 AKR1C2P52895 323 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 BRWD1-AS2P59051 145 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 EWSR1Q01844 656 aaKnown RBP eCLIP14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 CATR1Q13166 79 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 LRRC20Q8TCA0 184 aa14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 LYRM2Q9NU23 88 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-201ENST00000216840 IGSF23A1L1A6 192 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 LGALS8O00214 317 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 CHST1O43916 411 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 TMEM50AO95807 157 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 OMGP23515 440 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 VAMP2P63027 116 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 EFNB3Q15768 340 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 Q3ZCU0 254 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 ZNF66Q6ZN08 573 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 TCF23Q7RTU1 214 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 HSD17B13Q7Z5P4 300 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 UBAC2Q8NBM4 344 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 RNF141Q8WVD5 230 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 TCTEX1D2Q8WW35 142 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 DYNLRB1Q9NP97 96 aa14.28□□□□□ -0.12
RABGGTA-201ENST00000216840 C17orf98A8MV24 154 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 TMEM178BH3BS89 294 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 SIAH2O43255 324 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 CLDN1O95832 211 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 FGF2P09038 288 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 CAV2P51636 162 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 OR2B11Q5JQS5 317 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 FGFRL1Q8N441 504 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 FAM216AQ8WUB2 273 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 ARV1Q9H2C2 271 aa14.27□□□□□ -0.12
RABGGTA-201ENST00000216840 TRGV10A0A0A0MS01 117 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 TRAV38-1A0A0B4J264 116 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 KBTBD11-OT1A0A1B0GTJ5 212 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 LINC00473A8K010 186 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 WRBO00258 174 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 GPR12P47775 334 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 PAX9P55771 341 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 SWI5Q1ZZU3 235 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 ODF3L1Q8IXM7 274 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 C1orf87Q8N0U7 546 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 EIF4E3Q8N5X7 224 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 TCTEX1D1Q8N7M0 179 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 HSD17B10Q99714 261 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 MS4A5Q9H3V2 200 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 FAM212BQ9NTI7 297 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 CLN8Q9UBY8 286 aa14.27□□□□□ -0.13
RABGGTA-201ENST00000216840 NKX6-3A6NJ46 265 aa14.26□□□□□ -0.13
RABGGTA-201ENST00000216840 B9A039 149 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms