RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mmp27D3YV89 551 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Atf6bO35451 699 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Rab35Q6PHN9 201 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr923Q7TRB9 317 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Znf281Q99LI5 893 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Fer1l5P0DM40 2038 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Vmn1r5B2RQT2 315 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 P01804 111 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Sox7P40646 380 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 St3gal2Q11204 350 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1270Q8VGP3 304 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gabrg1Q9R0Y8 465 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gm14444A2ARW3 426 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gm5218F6YH22 154 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 TectbO08524 329 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 P01661 131 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 P01662 111 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 P01663 111 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Adora3Q61618 319 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr205Q7TS37 305 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr95Q8VFE2 312 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr828Q8VFM8 312 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1447Q8VFX3 309 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Slc25a22Q9D6M3 323 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Akip1Q9JJR5 212 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Prr32A2AFE9 284 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ube2dnl1A2AFH1 155 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr571E9Q407 322 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr635K7N6B1 321 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ndufb11O09111 151 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 H2-LP01897 362 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Cks2P56390 79 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Rims4P60191 269 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1340Q3KPC7 315 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Faap20Q3UN58 186 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Scgb1b27Q91WB5 92 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Syt13Q9EQT6 426 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Paqr4Q9JJE4 273 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Isg20Q9JL16 300 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ighv1-42A0A0A6YY38 117 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Zfp980A2A9J5 645 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gm14409A2ARR8 349 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Igfbp3P47878 292 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Adh4Q9QYY9 377 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Thbs4Q9Z1T2 963 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 4930435E12RikA6X8Z9 381 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Igk-V19-17P01633 149 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 ApcsP12246 224 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Thsd4Q3UTY6 1018 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Flrt1Q6RKD8 674 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1281Q7TQY6 305 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Cstl1Q80Y72 140 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 IqcjQ8BPW0 110 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Aqp3Q8R2N1 292 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Commd5Q8R395 224 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Glb1lQ8VC60 646 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1298Q8VGE6 312 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Clec2dQ91V08 207 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Tmem128Q9CZB9 163 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 MeiobQ9D513 470 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Atg2aQ6P4T0 1914 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr465-ps1A0A0U1RPZ4 315 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Scml2B1AVB3 969 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Dhrs3O88876 302 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Thbs3Q05895 956 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Zfp948Q6DFU8 667 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1201Q8VGF5 307 aa13.74□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Zfp362B1ASA5 418 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Vmn1r138D3YTY2 306 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gm8693E9PW18 306 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gm4498K9J7G4 306 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Vmn1r118L7N273 306 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 AY761185Q5ERI8 94 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1453Q8VFX0 307 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 GhitmQ91VC9 346 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Angpt4Q9WVH6 509 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Il18bpQ9Z0M9 193 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr548-ps1A0A1B0GSG0 314 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Pusl1A2ADA5 291 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gm21783J3QM57 227 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ccr8P56484 353 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ca10P61215 328 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Mtch1Q791T5 389 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 FcrlsQ9EQY5 509 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Timm9Q9WV98 89 aaKnown RBP13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gpr179E9PY61 2293 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1436A0PK57 315 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1158A2BHP7 313 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 DffbO54788 344 aaKnown RBP13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ptpmt1Q66GT5 193 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Znf2Q8BIQ3 427 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Vmn1r193Q8R258 319 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Sec11cQ9D8V7 192 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Rp1P56716 2095 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Aadacl3A2A7Z8 408 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ceacam12Q3UKP4 300 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Glra1Q64018 457 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1138Q8VFQ9 311 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr338Q8VGK6 306 aa13.73□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Xrcc2Q9CX47 278 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 61.6 ms