RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 OR8U9P0C7N5 309 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 HTR1DP28221 377 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 DLX6P56179 175 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 BPIFB3P59826 476 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 KLRD1Q13241 179 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 GNMTQ14749 295 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 BAK1Q16611 211 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 MORN2Q502X0 79 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 PLA1AQ53H76 456 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 CCDC144NLQ6NUI1 221 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 OVCH2Q7RTZ1 564 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 OR4C16Q8NGL9 310 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 OR8U1Q8NH10 309 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 SECTM1Q8WVN6 248 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 TRIM63Q969Q1 353 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 UPRTQ96BW1 309 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 CYYR1Q96J86 154 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 BEX2Q9BXY8 128 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 TMPRSS13Q9BYE2 586 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 TINAGL1Q9GZM7 467 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-220ENST00000641570 OR2D2Q9H210 308 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 UNKLQ9H9P5 680 aaKnown RBP10.6□□□□□ -0.71
PHGDH-220ENST00000641570 OR2W1Q9Y3N9 320 aa10.6□□□□□ -0.71
PHGDH-220ENST00000641570 TBL2Q9Y4P3 447 aaKnown RBP10.6□□□□□ -0.71
PHGDH-220ENST00000641570 PRRC2AP48634 2157 aaKnown RBP10.6□□□□□ -0.71
PHGDH-220ENST00000641570 IGHV3OR16-10A0A075B7F0 116 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 IGKV1D-8A0A087WSZ0 117 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 IGHV1-69DA0A0B4J2H0 117 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 BTBD17A6NE02 478 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 RAB29O14966 203 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 NPFFO15130 113 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 ST8SIA5O15466 376 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 TXNL1O43396 289 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 LANCL1O43813 399 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 MMP23AO75900 390 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 IGHV1-69P01742 117 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 CD74P04233 296 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 CGB3P0DN86 165 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 CGB7P0DN87 165 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 AADACP22760 399 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 DCTN2Q13561 401 aaKnown RBP10.59□□□□□ -0.71
PHGDH-220ENST00000641570 KLF9Q13886 244 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-220ENST00000641570 MIDNQ504T8 468 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 RBMS3Q6XE24 437 aaKnown RBP10.59□□□□□ -0.71
PHGDH-220ENST00000641570 IDO2Q6ZQW0 420 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 H1FOOQ8IZA3 346 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-220ENST00000641570 SLC38A6Q8IZM9 456 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 Q8N7P7 452 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 POC5Q8NA72 575 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 BEND2Q8NDZ0 799 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 OR56B4Q8NH76 319 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 ZFAND1Q8TCF1 268 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 GIMAP1Q8WWP7 306 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 TBX15Q96SF7 602 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 SLC6A7Q99884 636 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 TMUB1Q9BVT8 246 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 SLC5A7Q9GZV3 580 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 HRASLSQ9HDD0 168 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 PALMDQ9NP74 551 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 NUP50Q9UKX7 468 aa10.59□□□□□ -0.71
PHGDH-220ENST00000641570 MALRD1Q5VYJ5 2156 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 A0A087X0M5 115 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 FAM240BA0A1B0GVZ2 78 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 A0A1B0GX30 115 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 RNF212BA8MTL3 300 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 ITGB1BP1O14713 200 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 LYRM1O43325 122 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 MMP9P14780 707 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 CD34P28906 385 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 LOXL3P58215 753 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 PRB3Q04118 309 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-220ENST00000641570 HERPUD1Q15011 391 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 HLA-DRB5Q30154 266 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 LY6G6FQ5SQ64 297 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 MINOS1Q5TGZ0 78 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 FAAP20Q6NZ36 180 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 LYSMD2Q8IV50 215 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 ZNF645Q8N7E2 425 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 C8orf31Q8N9H6 132 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 CCDC71LQ8N9Z2 235 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 OR11H6Q8NGC7 330 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 OR51S1Q8NGJ8 323 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 DACT3Q96B18 629 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-220ENST00000641570 DPAGT1Q9H3H5 408 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 CDC42EP3Q9UKI2 254 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 MINOS1-NBL1R4GNA1 71 aa10.58□□□□□ -0.72
PHGDH-220ENST00000641570 CSMD1Q96PZ7 3565 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 ITPR2Q14571 2701 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 CREBBPQ92793 2442 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 RNASEK-C17orf49H0YIS7 233 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 HSD17B6O14756 317 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 TUSC2O75896 110 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 APOA2P02652 100 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 FBP1P09467 338 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 CATR1Q13166 79 aa10.57□□□□□ -0.72
PHGDH-220ENST00000641570 RBMS2Q15434 407 aaKnown RBP10.57□□□□□ -0.72
PHGDH-220ENST00000641570 FAM120AOSQ5T036 256 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms