RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 RHOVQ96L33 236 aa15.4■□□□□ 0.06
TARDBP-228ENST00000629725 MS4A10Q96PG2 267 aa15.4■□□□□ 0.06
TARDBP-228ENST00000629725 TMED9Q9BVK6 235 aa15.4■□□□□ 0.06
TARDBP-228ENST00000629725 SPACA1Q9HBV2 294 aa15.4■□□□□ 0.06
TARDBP-228ENST00000629725 RNF150Q9ULK6 438 aa15.4■□□□□ 0.06
TARDBP-228ENST00000629725 A0A1W2PP11 408 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 H0Y980 276 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 CIB2O75838 187 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 CD2P06729 351 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 RCC1P18754 421 aaPredicted RBP15.39■□□□□ 0.05
TARDBP-228ENST00000629725 CD40LGP29965 261 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 PLGLAQ15195 96 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 SLC22A6Q4U2R8 563 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 DDI2Q5TDH0 399 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 CD200R1LQ6Q8B3 271 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 GTSCR1Q86UQ5 136 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 LGALS12Q96DT0 336 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 TMEM138Q9NPI0 162 aa15.39■□□□□ 0.05
TARDBP-228ENST00000629725 SNTNA6NMZ2 147 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 EGR2P11161 476 aaPredicted RBP15.38■□□□□ 0.05
TARDBP-228ENST00000629725 GNMTQ14749 295 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 AKIRIN2Q53H80 203 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 ZNF833PQ6ZTB9 187 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 PYDC1Q8WXC3 89 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 FBXL15Q9H469 300 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 SLA2Q9H6Q3 261 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 TAF9BQ9HBM6 251 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 RANGRFQ9HD47 186 aaPredicted RBP15.38■□□□□ 0.05
TARDBP-228ENST00000629725 RETNQ9HD89 108 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 CNOT2Q9NZN8 540 aaKnown RBP15.38■□□□□ 0.05
TARDBP-228ENST00000629725 RCC2Q9P258 522 aaKnown RBP15.38■□□□□ 0.05
TARDBP-228ENST00000629725 ORC6Q9Y5N6 252 aa15.38■□□□□ 0.05
TARDBP-228ENST00000629725 RGS11O94810 467 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 ALPLP05186 524 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 ZP3P21754 424 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 OR3A3P47888 321 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 GBX2P52951 348 aaPredicted RBP15.37■□□□□ 0.05
TARDBP-228ENST00000629725 SNRPGP62308 76 aaKnown RBP15.37■□□□□ 0.05
TARDBP-228ENST00000629725 PPP3R1P63098 170 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 UNQ5815/PRO19632Q6UWF5 114 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 PPP1R27Q86WC6 154 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 GAPTQ8N292 157 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 OR52L2PQ8NGH6 319 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 GPR148Q8TDV2 347 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 RGP1Q92546 391 aaPredicted RBP15.37■□□□□ 0.05
TARDBP-228ENST00000629725 TMEM106AQ96A25 262 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 FAM103A1Q9BTL3 118 aaKnown RBP15.37■□□□□ 0.05
TARDBP-228ENST00000629725 JPT1Q9UK76 154 aa15.37■□□□□ 0.05
TARDBP-228ENST00000629725 SAA2-SAA4A0A096LPE2 208 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 FCN1O00602 326 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 EI24O14681 340 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 RRHO14718 337 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 SAA2P0DJI9 122 aaPredicted RBP15.36■□□□□ 0.05
TARDBP-228ENST00000629725 BDKRB2P30411 391 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 PPP1CCP36873 323 aaKnown RBP15.36■□□□□ 0.05
TARDBP-228ENST00000629725 GPR176Q14439 515 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 ZIK1Q3SY52 487 aaPredicted RBP15.36■□□□□ 0.05
TARDBP-228ENST00000629725 RAB12Q6IQ22 244 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 MRPS24Q96EL2 167 aaKnown RBP15.36■□□□□ 0.05
TARDBP-228ENST00000629725 FAM110AQ9BQ89 295 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 HIPK2Q9H2X6 1198 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 KCNIP1Q9NZI2 227 aa15.36■□□□□ 0.05
TARDBP-228ENST00000629725 TRGV3P03979 118 aa15.35■□□□□ 0.05
TARDBP-228ENST00000629725 TFAP2AP05549 437 aa15.35■□□□□ 0.05
TARDBP-228ENST00000629725 LFNGQ8NES3 379 aa15.35■□□□□ 0.05
TARDBP-228ENST00000629725 OR9G4Q8NGQ1 327 aa15.35■□□□□ 0.05
TARDBP-228ENST00000629725 THAP7Q9BT49 309 aaPredicted RBP15.35■□□□□ 0.05
TARDBP-228ENST00000629725 MBNL3Q9NUK0 354 aaKnown RBP15.35■□□□□ 0.05
TARDBP-228ENST00000629725 ERVK13-1Q9NX77 482 aa15.35■□□□□ 0.05
TARDBP-228ENST00000629725 AASSQ9UDR5 926 aa15.35■□□□□ 0.05
TARDBP-228ENST00000629725 PEX16Q9Y5Y5 336 aa15.35■□□□□ 0.05
TARDBP-228ENST00000629725 CEPT1Q9Y6K0 416 aa15.35■□□□□ 0.05
TARDBP-228ENST00000629725 SLC25A17O43808 307 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 YPEL1O60688 119 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 CA11O75493 328 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 GTF2A1P52655 376 aaPredicted RBP15.34■□□□□ 0.05
TARDBP-228ENST00000629725 HTD2P86397 168 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 FAM131AQ6UXB0 335 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 RDH12Q96NR8 316 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 YPEL2Q96QA6 119 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 ZNF184Q99676 751 aaPredicted RBP15.34■□□□□ 0.05
TARDBP-228ENST00000629725 GAB2Q9UQC2 676 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 GMPPBQ9Y5P6 360 aa15.34■□□□□ 0.05
TARDBP-228ENST00000629725 KMT2AQ03164 3969 aa15.33■□□□□ 0.04
TARDBP-228ENST00000629725 SC5DO75845 299 aa15.33■□□□□ 0.04
TARDBP-228ENST00000629725 FADS2O95864 444 aaKnown RBP15.33■□□□□ 0.04
TARDBP-228ENST00000629725 KLF5Q13887 457 aaPredicted RBP15.33■□□□□ 0.04
TARDBP-228ENST00000629725 LCN12Q6JVE5 192 aa15.33■□□□□ 0.04
TARDBP-228ENST00000629725 IL34Q6ZMJ4 242 aa15.33■□□□□ 0.04
TARDBP-228ENST00000629725 C5orf24Q7Z6I8 188 aa15.33■□□□□ 0.04
TARDBP-228ENST00000629725 ZNF554Q86TJ5 538 aa15.33■□□□□ 0.04
TARDBP-228ENST00000629725 OR2AK2Q8NG84 335 aa15.33■□□□□ 0.04
TARDBP-228ENST00000629725 C13orf42A0A1B0GVH6 325 aa15.32■□□□□ 0.04
TARDBP-228ENST00000629725 SHISA3A0PJX4 238 aa15.32■□□□□ 0.04
TARDBP-228ENST00000629725 MAS1P04201 325 aa15.32■□□□□ 0.04
TARDBP-228ENST00000629725 GSTP1P09211 210 aaKnown RBP15.32■□□□□ 0.04
TARDBP-228ENST00000629725 ALDH3A2P51648 485 aa15.32■□□□□ 0.04
TARDBP-228ENST00000629725 RIPK1Q13546 671 aa15.32■□□□□ 0.04
TARDBP-228ENST00000629725 LY6G6FQ5SQ64 297 aa15.32■□□□□ 0.04
TARDBP-228ENST00000629725 FAM71F2Q6NXP2 309 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms