RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 FAM90A10PA6NDY2 464 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 SPNP16150 400 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 SLURP1P55000 103 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 RPS11P62280 158 aaKnown RBP eCLIP14.7□□□□□ -0.06
SMN2-215ENST00000628696 ECSCRQ19T08 205 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 C5orf64Q2M2E5 130 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 DMKNQ6E0U4 476 aaPredicted RBP14.7□□□□□ -0.06
SMN2-215ENST00000628696 C10orf67Q8IYJ2 551 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 CASTOR1Q8WTX7 329 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 DLX4Q92988 240 aaPredicted RBP14.7□□□□□ -0.06
SMN2-215ENST00000628696 OR14A2Q96R54 314 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 JPT1Q9UK76 154 aa14.7□□□□□ -0.06
SMN2-215ENST00000628696 PNMA8CA0A1B0GUJ8 204 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 A0A1W2PN81 502 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 FAM90A7PA6NKC0 464 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 FAM90A23PA8MXZ1 464 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 SC5DO75845 299 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 FSTP19883 344 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 CHRNA7P36544 502 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 SIGIRRQ6IA17 410 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 MRPL30Q8TCC3 161 aaKnown RBP14.69□□□□□ -0.06
SMN2-215ENST00000628696 FAM46BQ96A09 425 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 RDH12Q96NR8 316 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 MBNL3Q9NUK0 354 aaKnown RBP14.69□□□□□ -0.06
SMN2-215ENST00000628696 DIMT1Q9UNQ2 313 aaKnown RBP14.69□□□□□ -0.06
SMN2-215ENST00000628696 A3GALT2U3KPV4 340 aa14.69□□□□□ -0.06
SMN2-215ENST00000628696 TRBV5-7A0A0A0MS05 114 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 LINC01619G3V211 115 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 YPEL1O60688 119 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 RGS11O94810 467 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 BAG2O95816 211 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 GLAP06280 429 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 FRMD6-AS1P0C7T7 363 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 CAPGP40121 348 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 MED21Q13503 144 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 ZNF833PQ6ZTB9 187 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 MINDY2Q8NBR6 621 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 NPBQ8NG41 125 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 ABHD5Q8WTS1 349 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 TMEM80Q96HE8 168 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 PGLYRP3Q96LB9 341 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 Q96M66 194 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 YPEL2Q96QA6 119 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 CST11Q9H112 138 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 S100A14Q9HCY8 104 aa14.68□□□□□ -0.06
SMN2-215ENST00000628696 SAA2-SAA4A0A096LPE2 208 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 PDCD6O75340 191 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 SAA2P0DJI9 122 aaPredicted RBP14.67□□□□□ -0.06
SMN2-215ENST00000628696 GP9P14770 177 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 HTD2P86397 168 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 NDPQ00604 133 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 PLGLAQ15195 96 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 ZNF554Q86TJ5 538 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 CDH26Q8IXH8 852 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 PQLC1Q8N2U9 271 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 OR2AK2Q8NG84 335 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 GALMQ96C23 342 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 TOLLIPQ9H0E2 274 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 GHITMQ9H3K2 345 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 FBXL15Q9H469 300 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 ZMAT4Q9H898 229 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 PALMDQ9NP74 551 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 SMPD3Q9NY59 655 aaPredicted RBP14.67□□□□□ -0.06
SMN2-215ENST00000628696 FBXO7Q9Y3I1 522 aa14.67□□□□□ -0.06
SMN2-215ENST00000628696 TENM2Q9NT68 2774 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 IGHV4OR15-8A0A075B7B6 117 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 A0A087WW49 117 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 LYL1P12980 280 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 FAM131AQ6UXB0 335 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 OR6Q1Q8NGQ2 317 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 IL1F10Q8WWZ1 152 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 ARPC1AQ92747 370 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 DERL3Q96Q80 235 aa14.66□□□□□ -0.06
SMN2-215ENST00000628696 FOXA2Q9Y261 457 aaPredicted RBP14.66□□□□□ -0.06
SMN2-215ENST00000628696 TRIM64CA6NLI5 447 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 SOX15O60248 233 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 NDUFA3O95167 84 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 IGHV3-11P01762 117 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 LGALS1P09382 135 aaKnown RBP14.65□□□□□ -0.06
SMN2-215ENST00000628696 DOC2BQ14184 412 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 SRSF7Q16629 238 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMN2-215ENST00000628696 LRRC36Q1X8D7 754 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 ZNF660Q6AZW8 331 aaPredicted RBP14.65□□□□□ -0.06
SMN2-215ENST00000628696 NEDD4LQ96PU5 975 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 ABRACLQ9P1F3 81 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 STEAP1Q9UHE8 339 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 LRRC42Q9Y546 428 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 DNAH7Q8WXX0 4024 aa14.65□□□□□ -0.06
SMN2-215ENST00000628696 RRHO14718 337 aa14.64□□□□□ -0.07
SMN2-215ENST00000628696 ST8SIA5O15466 376 aa14.64□□□□□ -0.07
SMN2-215ENST00000628696 GSTP1P09211 210 aaKnown RBP14.64□□□□□ -0.07
SMN2-215ENST00000628696 CX3CL1P78423 397 aa14.64□□□□□ -0.07
SMN2-215ENST00000628696 PITPNAQ00169 270 aa14.64□□□□□ -0.07
SMN2-215ENST00000628696 TMEM267Q0VDI3 215 aaPredicted RBP14.64□□□□□ -0.07
SMN2-215ENST00000628696 LY6G6FQ5SQ64 297 aa14.64□□□□□ -0.07
SMN2-215ENST00000628696 ACSM6Q6P461 480 aa14.64□□□□□ -0.07
SMN2-215ENST00000628696 GLDNQ6ZMI3 551 aaPredicted RBP14.64□□□□□ -0.07
SMN2-215ENST00000628696 ZNF485Q8NCK3 441 aa14.64□□□□□ -0.07
SMN2-215ENST00000628696 CYGBQ8WWM9 190 aa14.64□□□□□ -0.07
SMN2-215ENST00000628696 MS4A10Q96PG2 267 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms