RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 MTCP1P56278 107 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 RPS23P62266 143 aaKnown RBP3.85□□□□□ -1.79
VPS29-212ENST00000621131 BTG1P62324 171 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 ARFRP1Q13795 201 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 MEF2DQ14814 521 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 PPA1Q15181 289 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 ZMYND11Q15326 602 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 OR8B8Q15620 311 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 KISS1Q15726 138 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 HIKESHIQ53FT3 197 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 FAM166AQ6J272 317 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 GDPD3Q7L5L3 318 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 BHLHA15Q7RTS1 189 aaPredicted RBP3.85□□□□□ -1.79
VPS29-212ENST00000621131 TRAPPC6BQ86SZ2 158 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 MDP1Q86V88 176 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 TMEM17Q86X19 198 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 MKXQ8IYA7 352 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 GABRG1Q8N1C3 465 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 ACBD4Q8NC06 268 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 OR51T1Q8NGJ9 327 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 OR10R2Q8NGX6 335 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 OR8S1Q8NH09 359 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 OR2AE1Q8NHA4 323 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 NPRL2Q8WTW4 380 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 SNRNP27Q8WVK2 155 aaKnown RBP3.85□□□□□ -1.79
VPS29-212ENST00000621131 SLC7A6Q92536 515 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 BCL2L2Q92843 193 aaPredicted RBP3.85□□□□□ -1.79
VPS29-212ENST00000621131 YIPF5Q969M3 257 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 SGK3Q96BR1 496 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 MUCL1Q96DR8 90 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 RAB3CQ96E17 227 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 NEDD4LQ96PU5 975 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 TAAR6Q96RI8 345 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 ABHD1Q96SE0 405 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 RTL8AQ9BWD3 113 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 PAPOLGQ9BWT3 736 aaKnown RBP3.85□□□□□ -1.79
VPS29-212ENST00000621131 GPN1Q9HCN4 374 aaPredicted RBP3.85□□□□□ -1.79
VPS29-212ENST00000621131 GPR173Q9NS66 373 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 MCUBQ9NWR8 336 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 PTTG3PQ9NZH4 202 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 ZNF107Q9UII5 783 aaPredicted RBP3.85□□□□□ -1.79
VPS29-212ENST00000621131 SCP2D1Q9UJQ7 156 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 ZNF221Q9UK13 617 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 PLEKHA6Q9Y2H5 1048 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 MPC1Q9Y5U8 109 aa3.85□□□□□ -1.79
VPS29-212ENST00000621131 DCHS2Q6V1P9 2916 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 IGHV4-30-2A0A087WSY4 118 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 hCG_1807616A0A1W2PRN6 198 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 ANKRD20A5PA0PJZ0 165 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 OR5B21A6NL26 309 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 SERPINE3A8MV23 424 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 TMEM14DPA8MWL7 114 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 KLLNB2CW77 178 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 ZNF736B4DX44 427 aaPredicted RBP3.84□□□□□ -1.79
VPS29-212ENST00000621131 INMT-MINDY4F8WBC2 141 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 TRAPPC2LH3BP13 241 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 H7C417 338 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 K7EM74 188 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 PHOX2AO14813 284 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 GMDSO60547 372 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 CCNKO75909 580 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 LYZL6O75951 148 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 RAB3DO95716 219 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 CST4P01036 141 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 MT-ND4P03905 459 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 IFNA6P05013 189 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 IRF2P14316 349 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 CBR1P16152 277 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 MGMTP16455 207 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 COX5AP20674 150 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 IGHV1-2P23083 117 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 HLA-DMAP28067 261 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 SLC6A1P30531 599 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 RAD52P43351 418 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 ALDH3B1P43353 468 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 OR3A4PP47883 348 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 IDH3GP51553 393 aaPredicted RBP3.84□□□□□ -1.79
VPS29-212ENST00000621131 RAG2P55895 527 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 TAS2R46P59540 309 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 PPP1CBP62140 327 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 RPS27AP62979 156 aaKnown RBP3.84□□□□□ -1.79
VPS29-212ENST00000621131 FAM3AP98173 230 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 KLRB1Q12918 225 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 PRDX4Q13162 271 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 GUSBP1Q15486 140 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 GABRA6Q16445 453 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 CEACAM21Q3KPI0 293 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 CDNFQ49AH0 187 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 SLC22A6Q4U2R8 563 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 RNASE10Q5GAN6 216 aaKnown RBP3.84□□□□□ -1.79
VPS29-212ENST00000621131 AGAP6Q5VW22 663 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 OLFML2AQ68BL7 652 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 C11orf88Q6PI97 169 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 C3P1Q6ZMU1 363 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 IL17RELQ6ZVW7 336 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 NAA40Q86UY6 237 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 SAXO1Q8IYX7 474 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 OR5AS1Q8N127 324 aa3.84□□□□□ -1.79
VPS29-212ENST00000621131 ZSCAN4Q8NAM6 433 aaPredicted RBP3.84□□□□□ -1.79
VPS29-212ENST00000621131 TMEM229BQ8NBD8 167 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms