RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 KIR2DS2P43631 304 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 ZNF552Q9H707 407 aaPredicted RBP11.93□□□□□ -0.5
CNOT3-210ENST00000618939 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 TUBD1Q9UJT1 453 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 ADH4P08319 380 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 BCL2P10415 239 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 NAT1P18440 290 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 MOGAT3Q86VF5 341 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 LOC105371267A0A1B0GV96 52 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 CELA3AP09093 270 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 BPIFB3P59826 476 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 MRPS11P82912 194 aaKnown RBP11.93□□□□□ -0.5
CNOT3-210ENST00000618939 DENND4CQ5VZ89 1909 aa11.93□□□□□ -0.5
CNOT3-210ENST00000618939 ZNF705AQ6ZN79 300 aaPredicted RBP11.93□□□□□ -0.5
CNOT3-210ENST00000618939 TRAV20A0A0B4J274 112 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 RHOBP62745 196 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 ZNF703Q9H7S9 590 aaPredicted RBP11.92□□□□□ -0.5
CNOT3-210ENST00000618939 CARHSP1Q9Y2V2 147 aaKnown RBP11.92□□□□□ -0.5
CNOT3-210ENST00000618939 PHF3Q92576 2039 aaKnown RBP11.92□□□□□ -0.5
CNOT3-210ENST00000618939 ERVFC1-1P60608 527 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 HES1Q14469 280 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 IL22RA2Q969J5 263 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 SIGLEC12Q96PQ1 595 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 NDUFB3O43676 98 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 HBZP02008 142 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 OR10J4P0C629 311 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 ERVS71-1P61550 626 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 GNB1P62873 340 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 ZNF826PQ6ZT77 177 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 MARS2Q96GW9 593 aaKnown RBP11.92□□□□□ -0.5
CNOT3-210ENST00000618939 IL36GQ9NZH8 169 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 SPAARA0A1B0GVQ0 90 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 COX7A2P2O60397 106 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 IZUMO4Q1ZYL8 232 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 SLC35E3Q7Z769 313 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 ADTRPQ96IZ2 230 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
CNOT3-210ENST00000618939 hADV38S2A0JD32 116 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 RPS2P15880 293 aaKnown RBP11.91□□□□□ -0.5
CNOT3-210ENST00000618939 STUMQ69YW2 141 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 TMEM108Q6UXF1 575 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 KDF1Q8NAX2 398 aaPredicted RBP11.91□□□□□ -0.5
CNOT3-210ENST00000618939 MRPL30Q8TCC3 161 aaKnown RBP11.91□□□□□ -0.5
CNOT3-210ENST00000618939 ZNF665Q9H7R5 613 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 OR1A1Q9P1Q5 309 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 ICE1Q9Y2F5 2266 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 KLF7O75840 302 aaPredicted RBP11.91□□□□□ -0.5
CNOT3-210ENST00000618939 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
CNOT3-210ENST00000618939 CD82P27701 267 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 TGIF1Q15583 401 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 LRRC10Q5BKY1 277 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 DHRS7BQ6IAN0 325 aaPredicted RBP11.91□□□□□ -0.5
CNOT3-210ENST00000618939 GFRALQ6UXV0 394 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 AP1S3Q96PC3 154 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 C1QTNF5Q9BXJ0 243 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 SEMA5BQ9P283 1151 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 COL4A4P53420 1690 aaPredicted RBP11.91□□□□□ -0.5
CNOT3-210ENST00000618939 PAGE4O60829 102 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 COL10A1Q03692 680 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 OR2T10Q8NGZ9 312 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 FOXJ2Q9P0K8 574 aa11.91□□□□□ -0.5
CNOT3-210ENST00000618939 XKRY2A2RUG3 117 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 FGFRL1Q8N441 504 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 ZNF439Q8NDP4 499 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 OR1L1Q8NH94 360 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 CTDSP1Q9GZU7 261 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 APC2O95996 2303 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 FANCMQ8IYD8 2048 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 IGKV1D-8A0A087WSZ0 117 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 RND3P61587 244 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 NRN1LQ496H8 165 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 FAM78BQ5VT40 261 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 DBX2Q6ZNG2 339 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 OR5P3Q8WZ94 311 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 SMIM8Q96KF7 97 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 LURAP1Q96LR2 239 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 REPIN1Q9BWE0 567 aaKnown RBP11.9□□□□□ -0.5
CNOT3-210ENST00000618939 SLC45A2Q9UMX9 530 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 F8VVB4 439 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 F8VWA3 439 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 H0YL77 283 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 ACP1P24666 158 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 PRDX2P32119 198 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 PTGDSP41222 190 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 TMEM56Q96MV1 263 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 RARRES2Q99969 163 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 SLC35D1Q9NTN3 355 aa11.9□□□□□ -0.5
CNOT3-210ENST00000618939 DNASE2O00115 360 aaPredicted RBP11.9□□□□□ -0.51
CNOT3-210ENST00000618939 CEBPDP49716 269 aaPredicted RBP11.9□□□□□ -0.51
CNOT3-210ENST00000618939 ARSJQ5FYB0 599 aaPredicted RBP11.9□□□□□ -0.51
CNOT3-210ENST00000618939 ABLIM2Q6H8Q1 611 aa11.9□□□□□ -0.51
CNOT3-210ENST00000618939 OR10A7Q8NGE5 316 aa11.9□□□□□ -0.51
CNOT3-210ENST00000618939 SH2D2AQ9NP31 389 aa11.9□□□□□ -0.51
CNOT3-210ENST00000618939 IGSF23A1L1A6 192 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms