RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 MOB1BQ7L9L4 216 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 ZNF695Q8IW36 515 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 OR52L2PQ8NGH6 319 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 DPF1Q92782 380 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 URM1Q9BTM9 101 aaKnown RBP15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 FAAP24Q9BTP7 215 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 ZMAT5Q9UDW3 170 aaKnown RBP15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 STEAP1Q9UHE8 339 aa15.01□□□□□ -0.01
CCDC28A-203ENST00000617445 RGS10O43665 173 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 ARL6IP5O75915 188 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 OR5H8P0DN80 308 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 BLVRBP30043 206 aaPredicted RBP15□□□□□ -0.01
CCDC28A-203ENST00000617445 PPP1CCP36873 323 aaKnown RBP15□□□□□ -0.01
CCDC28A-203ENST00000617445 F2RL1P55085 397 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 QRFPP83859 136 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 OR10K2Q6IF99 312 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 FAM71F2Q6NXP2 309 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 ETV3LQ6ZN32 361 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 C6orf201Q7Z4U5 140 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 RNF152Q8N8N0 203 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 KLHL30-AS1Q8NEE0 82 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 OR2AK2Q8NG84 335 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 ANKRD60Q9BZ19 345 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 GHITMQ9H3K2 345 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 PLEKHJ1Q9NW61 149 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 MGAT4AQ9UM21 535 aa15□□□□□ -0.01
CCDC28A-203ENST00000617445 NAPSAO96009 420 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 IGF1P05019 195 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 VDAC1P21796 283 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 CDX1P47902 265 aaPredicted RBP14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 EGFEM1PQ0D2K5 195 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 MLLT11Q13015 90 aaPredicted RBP14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 UNC119Q13432 240 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 GNMTQ14749 295 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 ZNF880Q6PDB4 577 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 C8orf86Q6ZUL3 223 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 ODF3L1Q8IXM7 274 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 P2RX4Q99571 388 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 PIPOXQ9P0Z9 390 aa14.99□□□□□ -0.01
CCDC28A-203ENST00000617445 TRBV6-6A0A0A6YYG2 114 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 SLC17A2O00624 439 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 IGHG4P01861 327 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 HSMCR30P0CW71 290 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 ARSBP15848 533 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 CPEP16870 476 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 PSMD7P51665 324 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 MMDQ15546 238 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 ZNF833PQ6ZTB9 187 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 PRSS48Q7RTY5 328 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 SVOPQ8N4V2 548 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 FAM89BQ8N5H3 189 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 TMEM203Q969S6 136 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 NABP2Q9BQ15 211 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 PLGRKTQ9HBL7 147 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 CHMP1AQ9HD42 196 aaPredicted RBP14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 HSF4Q9ULV5 492 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 DNAH3Q8TD57 4116 aa14.98□□□□□ -0.01
CCDC28A-203ENST00000617445 ITGB1BP1O14713 200 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 CRHBPP24387 322 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 HSPA13P48723 471 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 KIR2DS1Q14954 304 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 TMEM91Q6ZNR0 172 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 IL1F10Q8WWZ1 152 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 HSPB9Q9BQS6 159 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 ZNF251Q9BRH9 671 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 NICN1Q9BSH3 213 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 MRPL20Q9BYC9 149 aaKnown RBP14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 LPAR5Q9H1C0 372 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 ACOT13Q9NPJ3 140 aa14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 ZNF107Q9UII5 783 aaPredicted RBP14.97□□□□□ -0.01
CCDC28A-203ENST00000617445 CCL24O00175 119 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 RAB29O14966 203 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 RPLP1P05386 114 aaKnown RBP14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 ACTBP60709 375 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 CFHR3Q02985 330 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 C18orf65Q6ZTR6 163 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 OR8U1Q8NH10 309 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 MGLLQ99685 303 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 CCDC90BQ9GZT6 254 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 SLC23A1Q9UHI7 598 aa14.96□□□□□ -0.01
CCDC28A-203ENST00000617445 SAA2-SAA4A0A096LPE2 208 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 HLA-DRB1P01911 266 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 SAA2P0DJI9 122 aaPredicted RBP14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 RPS25P62851 125 aaKnown RBP14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 RAB11BQ15907 218 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 IZUMO2Q6UXV1 221 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 NPBQ8NG41 125 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 EDARADDQ8WWZ3 215 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 CYYR1Q96J86 154 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 IFI27L2Q9H2X8 130 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 KIAA1456Q9P272 454 aa14.95□□□□□ -0.02
CCDC28A-203ENST00000617445 A0A0A6YYD4 124 aa14.94□□□□□ -0.02
CCDC28A-203ENST00000617445 K7EIL1 84 aa14.94□□□□□ -0.02
CCDC28A-203ENST00000617445 NBR2O15453 112 aa14.94□□□□□ -0.02
CCDC28A-203ENST00000617445 SOCS1O15524 211 aa14.94□□□□□ -0.02
CCDC28A-203ENST00000617445 ZBTB25P24278 435 aa14.94□□□□□ -0.02
CCDC28A-203ENST00000617445 PSMB8P28062 276 aa14.94□□□□□ -0.02
CCDC28A-203ENST00000617445 MC5RP33032 325 aa14.94□□□□□ -0.02
CCDC28A-203ENST00000617445 OR3A3P47888 321 aa14.94□□□□□ -0.02
CCDC28A-203ENST00000617445 KRTAP10-11P60412 298 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms