RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 MGAT4AQ9UM21 535 aa17.63■□□□□ 0.41
CBWD3-212ENST00000616550 STUB1Q9UNE7 303 aa17.63■□□□□ 0.41
CBWD3-212ENST00000616550 FOXI3A8MTJ6 420 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-212ENST00000616550 FGF16O43320 207 aa17.62■□□□□ 0.41
CBWD3-212ENST00000616550 NDUFA11Q86Y39 141 aa17.62■□□□□ 0.41
CBWD3-212ENST00000616550 CITED2Q99967 270 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-212ENST00000616550 CMSS1Q9BQ75 279 aaKnown RBP17.62■□□□□ 0.41
CBWD3-212ENST00000616550 HDHD3Q9BSH5 251 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-212ENST00000616550 TXNL4BQ9NX01 149 aaKnown RBP17.62■□□□□ 0.41
CBWD3-212ENST00000616550 SSR3Q9UNL2 185 aa17.62■□□□□ 0.41
CBWD3-212ENST00000616550 NCBP2LA6PVI3 153 aaKnown RBP17.61■□□□□ 0.41
CBWD3-212ENST00000616550 LANCL1O43813 399 aa17.61■□□□□ 0.41
CBWD3-212ENST00000616550 MOSP00540 346 aa17.61■□□□□ 0.41
CBWD3-212ENST00000616550 FGF9P31371 208 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-212ENST00000616550 OR2AK2Q8NG84 335 aa17.61■□□□□ 0.41
CBWD3-212ENST00000616550 C12orf4Q9NQ89 552 aa17.61■□□□□ 0.41
CBWD3-212ENST00000616550 MRPS15P82914 257 aaKnown RBP17.6■□□□□ 0.41
CBWD3-212ENST00000616550 PLA2G7Q13093 441 aa17.6■□□□□ 0.41
CBWD3-212ENST00000616550 PLAC9Q5JTB6 97 aa17.6■□□□□ 0.41
CBWD3-212ENST00000616550 Q6ZPA2 131 aa17.6■□□□□ 0.41
CBWD3-212ENST00000616550 RAB3CQ96E17 227 aa17.6■□□□□ 0.41
CBWD3-212ENST00000616550 ZNF736B4DX44 427 aaPredicted RBP17.59■□□□□ 0.41
CBWD3-212ENST00000616550 RAB6AP20340 208 aa17.59■□□□□ 0.41
CBWD3-212ENST00000616550 GADD45AP24522 165 aa17.59■□□□□ 0.41
CBWD3-212ENST00000616550 KCTD21Q4G0X4 260 aa17.59■□□□□ 0.41
CBWD3-212ENST00000616550 TPRA1Q86W33 373 aa17.59■□□□□ 0.41
CBWD3-212ENST00000616550 Q8N6K4 173 aa17.59■□□□□ 0.41
CBWD3-212ENST00000616550 Q9N2K0 584 aa17.59■□□□□ 0.41
CBWD3-212ENST00000616550 METTL21EPA6NDL7 271 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 OPN1MWP04001 364 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 OPN1MW2P0DN77 364 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 OPN1MW3P0DN78 364 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 HLA-DRB3P79483 266 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 CD83Q01151 205 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 NEDD8Q15843 81 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 ODF3L1Q8IXM7 274 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 OR4X2Q8NGF9 303 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 OR10R2Q8NGX6 335 aa17.58■□□□□ 0.4
CBWD3-212ENST00000616550 A0A0B4J203 849 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 TCRBV4S1A1TA0A5B7 111 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 SMIM30A4D0T7 59 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 NOTOA8MTQ0 251 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 HSPA12AO43301 675 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 CD3GP09693 182 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 ZBTB25P24278 435 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 LSAMPQ13449 338 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 SLC35E3Q7Z769 313 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 NR2C2APQ86WQ0 139 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 OR4F17Q8NGA8 305 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 OR8H1Q8NGG4 311 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 PTX4Q96A99 478 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 R3HDM4Q96D70 268 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 OR4F4Q96R69 305 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 OR51E2Q9H255 320 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 PIPOXQ9P0Z9 390 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 SLC23A1Q9UHI7 598 aa17.57■□□□□ 0.4
CBWD3-212ENST00000616550 PSMB11A5LHX3 300 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 SERPINE3A8MV23 424 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 ST8SIA5O15466 376 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 SLC2A2P11168 524 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-212ENST00000616550 CEACAM6P40199 344 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 OR3A3P47888 321 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 MOGAT2Q3SYC2 334 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 FOXRED2Q8IWF2 684 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 Q8N9W7 124 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 CHPT1Q8WUD6 406 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 KCTD7Q96MP8 289 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 RASL11BQ9BPW5 248 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 LIN7CQ9NUP9 197 aaKnown RBP17.56■□□□□ 0.4
CBWD3-212ENST00000616550 KCNK7Q9Y2U2 307 aa17.56■□□□□ 0.4
CBWD3-212ENST00000616550 SAA2-SAA4A0A096LPE2 208 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 A0A1W2PRX2 142 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 ADARB2-AS1A8MUL3 147 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 TRDCB7Z8K6 153 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 RAB29O14966 203 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 IGHG2P01859 326 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 SCTP09683 121 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 SAA2P0DJI9 122 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-212ENST00000616550 DEFA6Q01524 100 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 ZNF833PQ6ZTB9 187 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 EDARADDQ8WWZ3 215 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 S1PR3Q99500 378 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 CHCHD6Q9BRQ6 235 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 MRPL20Q9BYC9 149 aaKnown RBP17.55■□□□□ 0.4
CBWD3-212ENST00000616550 ATG5Q9H1Y0 275 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 ABCG5Q9H222 651 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 IFI27L2Q9H2X8 130 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 GHITMQ9H3K2 345 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 PLSCR3Q9NRY6 295 aa17.55■□□□□ 0.4
CBWD3-212ENST00000616550 TSSC4Q9Y5U2 329 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-212ENST00000616550 A0A075B6Q4 140 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 RAB27BO00194 218 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 ITGB1BP1O14713 200 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 GNB3P16520 340 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 CD36P16671 472 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 F2RL1P55085 397 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 TCTEX1D4Q5JR98 221 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 FAM71F2Q6NXP2 309 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 C10orf99Q6UWK7 81 aa17.54■□□□□ 0.4
CBWD3-212ENST00000616550 NOL4LQ96MY1 436 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms