RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 RAB29O14966 203 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 MMP23AO75900 390 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 AVPP01185 164 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 IFNA6P05013 189 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 PTHLHP12272 177 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 HOXB4P17483 251 aaPredicted RBP10.01□□□□□ -0.81
TGFB1-204ENST00000600196 EPHA1P21709 976 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 NFYBP25208 207 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 UCP3P55916 312 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 TAGLNQ01995 201 aaKnown RBP10.01□□□□□ -0.81
TGFB1-204ENST00000600196 HLA-DRB5Q30154 266 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 CCDC144NLQ6NUI1 221 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 STEAP1BQ6NZ63 245 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 C1orf229Q6ZS94 237 aaPredicted RBP10.01□□□□□ -0.81
TGFB1-204ENST00000600196 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 TOMM5Q8N4H5 51 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 DTX3Q8N9I9 347 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 LHX4Q969G2 390 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 TRIM63Q969Q1 353 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 AGMATQ9BSE5 352 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 SUCNR1Q9BXA5 334 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 MEGF9Q9H1U4 602 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 SLC2A8Q9NY64 477 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 RDH8Q9NYR8 311 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 CSMD1Q96PZ7 3565 aa10.01□□□□□ -0.81
TGFB1-204ENST00000600196 ZANQ9Y493 2812 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 IGKV1D-8A0A087WSZ0 117 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 CENPXA8MT69 81 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 DISC1C4P0D8 188 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 BUB1B-PAK6H3BSN5 160 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 NPFFO15130 113 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 FCER2P06734 321 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 OMGP23515 440 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 DYNLT3P51808 116 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 MADCAM1Q13477 382 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 SURF2Q15527 256 aaPredicted RBP10□□□□□ -0.81
TGFB1-204ENST00000600196 IGSF11Q5DX21 431 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 CT45A1Q5HYN5 189 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 KLF17Q5JT82 389 aaPredicted RBP10□□□□□ -0.81
TGFB1-204ENST00000600196 TRIQKQ629K1 86 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF660Q6AZW8 331 aaPredicted RBP10□□□□□ -0.81
TGFB1-204ENST00000600196 PNKDQ8N490 385 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 OR52L2PQ8NGH6 319 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 CT45A3Q8NHU0 189 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 AKR1E2Q96JD6 320 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 SCGB3A2Q96PL1 93 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 PRRT1Q99946 306 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 ABHD14AQ9BUJ0 271 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 BEX2Q9BXY8 128 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 SIRT7Q9NRC8 400 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF69Q9UC07 566 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 F8P00451 2351 aa10□□□□□ -0.81
TGFB1-204ENST00000600196 A0A0A6YYJ9 748 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 VGLL3A8MV65 326 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 LY6LH3BQJ8 138 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 BET1O15155 118 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 LANCL1O43813 399 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 RAB3DO95716 219 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 CD3DP04234 171 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 GAPDHP04406 335 aaKnown RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 ARG1P05089 322 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 HRH1P35367 487 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 INPP1P49441 399 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 LUMP51884 338 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 TSPAN5P62079 268 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF816Q0VGE8 651 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 KLF9Q13886 244 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF782Q6ZMW2 699 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 OR8H3Q8N146 312 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 OR4P4Q8NGL7 312 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 OR10X1Q8NGY0 326 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 TERB2Q8NHR7 220 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 GCDHQ92947 438 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 ST6GALNAC6Q969X2 333 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF486Q96H40 463 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 S1PR3Q99500 378 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 TSC22D3Q99576 134 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 SDHCQ99643 169 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 MS4A7Q9GZW8 240 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 C11orf54Q9H0W9 315 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-204ENST00000600196 PALMDQ9NP74 551 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 EHFQ9NZC4 300 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 SCP2D1Q9UJQ7 156 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF221Q9UK13 617 aa9.99□□□□□ -0.81
TGFB1-204ENST00000600196 TLN2Q9Y4G6 2542 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 TRAV40A0A0B4J280 105 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 PPYP01298 95 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 FBP1P09467 338 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 IL7P13232 177 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 HLA-DMAP28067 261 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 FCGR2CP31995 323 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 PPP1CCP36873 323 aaKnown RBP9.98□□□□□ -0.81
TGFB1-204ENST00000600196 SRP14P37108 136 aaKnown RBP9.98□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF134P52741 427 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 LHFPL1Q86WI0 220 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 THNSL2Q86YJ6 484 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 OR10V1Q8NGI7 309 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 MAFIPQ8WZ33 124 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 MOB3AQ96BX8 217 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 ADTRPQ96IZ2 230 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms