RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 IFNA2P01563 188 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 IGLV2-14P01704 120 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 TMEM30BQ3MIR4 351 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 MORN2Q502X0 79 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 YPEL2Q96QA6 119 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 GAL3ST2Q9H3Q3 398 aa17.15■□□□□ 0.34
PNKP-203ENST00000593946 RBM7Q9Y580 266 aaKnown RBP17.15■□□□□ 0.34
PNKP-203ENST00000593946 A0A0B4J2A0 478 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 MPPED1O15442 326 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 CMTM1Q8IZ96 169 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 TCTE3Q8IZS6 198 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 ZNF525Q8N782 197 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 FAM216AQ8WUB2 273 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 ZNF714Q96N38 554 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 PATZ1Q9HBE1 687 aaKnown RBP17.14■□□□□ 0.33
PNKP-203ENST00000593946 GFOD1Q9NXC2 390 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 IDI2-AS1Q9NZ38 188 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 SHPKQ9UHJ6 478 aa17.14■□□□□ 0.33
PNKP-203ENST00000593946 DBX1A6NMT0 343 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 F5H0A9 414 aaPredicted RBP17.13■□□□□ 0.33
PNKP-203ENST00000593946 SLC22A5O76082 557 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 ANXA3P12429 323 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 COL8A1P27658 744 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 ANKRD55Q3KP44 614 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 LIN54Q6MZP7 749 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 C11orf88Q6PI97 169 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 OR52M1Q8NGK5 317 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 EDARADDQ8WWZ3 215 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 AKR1E2Q96JD6 320 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 ZNF436Q9C0F3 470 aaPredicted RBP17.13■□□□□ 0.33
PNKP-203ENST00000593946 KCNIP3Q9Y2W7 256 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 ASH1LQ9NR48 2969 aaKnown RBP17.13■□□□□ 0.33
PNKP-203ENST00000593946 CCL3L1P16619 93 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 WDR25Q64LD2 544 aaPredicted RBP17.13■□□□□ 0.33
PNKP-203ENST00000593946 TBC1D26Q86UD7 250 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 OR10A7Q8NGE5 316 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 COQ8AQ8NI60 647 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 AGMATQ9BSE5 352 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 PRR13Q9NZ81 148 aa17.13■□□□□ 0.33
PNKP-203ENST00000593946 PTPN13Q12923 2485 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 GOSR2O14653 212 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 MMP23AO75900 390 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 RGS11O94810 467 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 OR5AC1P0C628 307 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 HLA-GP17693 338 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 LY6G6FQ5SQ64 297 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 HEPN1Q6WQI6 88 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 DRAM1Q8N682 238 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 ZNF645Q8N7E2 425 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 SUCNR1Q9BXA5 334 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 OR2D2Q9H210 308 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 RPUSD1Q9UJJ7 312 aaKnown RBP17.12■□□□□ 0.33
PNKP-203ENST00000593946 KCNS2Q9ULS6 477 aa17.12■□□□□ 0.33
PNKP-203ENST00000593946 ITGB1BP1O14713 200 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 PGLYRP1O75594 196 aaPredicted RBP17.11■□□□□ 0.33
PNKP-203ENST00000593946 OR2A4O95047 310 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 S100GP29377 79 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 DLX6P56179 175 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 H2BFSP57053 126 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 TMEM187Q14656 261 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 MSMO1Q15800 293 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 PRAMEF5Q5TYX0 476 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 KCTD9Q7L273 389 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 OR2A7Q96R45 310 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 GPHA2Q96T91 129 aa17.11■□□□□ 0.33
PNKP-203ENST00000593946 ARHGAP32A7KAX9 2087 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 C3orf85A0A1B0GTC6 90 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 SP6Q3SY56 376 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 UTF1Q5T230 341 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 DCAF12L2Q5VW00 463 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 OR5M8Q8NGP6 311 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 C8orf46Q8TAG6 207 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 GLYATL2Q8WU03 294 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 DMRTB1Q96MA1 342 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 TP53RKQ96S44 253 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 NARFLQ9H6Q4 476 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 PIPOXQ9P0Z9 390 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 RNF150Q9ULK6 438 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 PSG11Q9UQ72 335 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 ANKRD17O75179 2603 aaKnown RBP17.1■□□□□ 0.33
PNKP-203ENST00000593946 ST8SIA5O15466 376 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 TNFSF12O43508 249 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 SIX6O95475 246 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 GIPP09681 153 aaPredicted RBP17.1■□□□□ 0.33
PNKP-203ENST00000593946 PDLIM4P50479 330 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 ZNF134P52741 427 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 ZBTB34Q8NCN2 500 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 NRGNQ92686 78 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 C5orf30Q96GV9 206 aa17.1■□□□□ 0.33
PNKP-203ENST00000593946 PHF1O43189 567 aaPredicted RBP17.09■□□□□ 0.33
PNKP-203ENST00000593946 PAX1P15863 534 aa17.09■□□□□ 0.33
PNKP-203ENST00000593946 NFYBP25208 207 aa17.09■□□□□ 0.33
PNKP-203ENST00000593946 ZNF439Q8NDP4 499 aa17.09■□□□□ 0.33
PNKP-203ENST00000593946 MSI2Q96DH6 328 aaKnown RBP17.09■□□□□ 0.33
PNKP-203ENST00000593946 PSMG3-AS1Q96PY0 264 aa17.09■□□□□ 0.33
PNKP-203ENST00000593946 BPESC1Q9GZL8 116 aa17.09■□□□□ 0.33
PNKP-203ENST00000593946 BARX1Q9HBU1 254 aaPredicted RBP17.09■□□□□ 0.33
PNKP-203ENST00000593946 F2RP25116 425 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 ATP5J2P56134 94 aa17.08■□□□□ 0.32
PNKP-203ENST00000593946 GNB2P62879 340 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms