RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 TPRKBQ9Y3C4 175 aa12.47□□□□□ -0.41
CRLF3-203ENST00000578692 SLC22A1O15245 554 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 ELANEP08246 267 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 UCHL1P09936 223 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 UNC119Q13432 240 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 FOXE3Q13461 319 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 IRF3Q14653 427 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 HMGN3Q15651 99 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 LIPKQ5VXJ0 399 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 DPF1Q92782 380 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 UFD1Q92890 307 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 TMEM203Q969S6 136 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 DUX3Q96PT4 197 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 NICN1Q9BSH3 213 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 ABRACLQ9P1F3 81 aa12.46□□□□□ -0.41
CRLF3-203ENST00000578692 WI2-2373I1.2A0A1W2PRP0 233 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 TMEM14DPA8MWL7 114 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 CCL24O00175 119 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 SLC2A2P11168 524 aaPredicted RBP12.45□□□□□ -0.42
CRLF3-203ENST00000578692 VDAC1P21796 283 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 BLVRBP30043 206 aaPredicted RBP12.45□□□□□ -0.42
CRLF3-203ENST00000578692 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
CRLF3-203ENST00000578692 AQP4P55087 323 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 QRFPP83859 136 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 MMDQ15546 238 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 LCNL1Q6ZST4 164 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 RNF152Q8N8N0 203 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 OR6M1Q8NGM8 313 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 NRG4Q8WWG1 115 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 RAX2Q96IS3 184 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 NABP2Q9BQ15 211 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 KCNK15Q9H427 330 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 DUSP21Q9H596 190 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 CHMP1AQ9HD42 196 aaPredicted RBP12.45□□□□□ -0.42
CRLF3-203ENST00000578692 PLEKHJ1Q9NW61 149 aa12.45□□□□□ -0.42
CRLF3-203ENST00000578692 BPNT1O95861 308 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 IGHG4P01861 327 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 IGF1P05019 195 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 HSMCR30P0CW71 290 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 OR3A3P47888 321 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 ACTBP60709 375 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 CFHR3Q02985 330 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 TPBGQ13641 420 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 KIR2DS1Q14954 304 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 TMEM91Q6ZNR0 172 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 ZNF833PQ6ZTB9 187 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 OR2AK2Q8NG84 335 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 IL1F10Q8WWZ1 152 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 RITA1Q96K30 269 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 ZNF251Q9BRH9 671 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 CHCHD6Q9BRQ6 235 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 MRPL20Q9BYC9 149 aaKnown RBP12.44□□□□□ -0.42
CRLF3-203ENST00000578692 STEAP1Q9UHE8 339 aa12.44□□□□□ -0.42
CRLF3-203ENST00000578692 ZNF107Q9UII5 783 aaPredicted RBP12.44□□□□□ -0.42
CRLF3-203ENST00000578692 RGS10O43665 173 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 NAPSAO96009 420 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 OR5H8P0DN80 308 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 ARSBP15848 533 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 MYF6P23409 242 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 TRAM1Q15629 374 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 ZNF880Q6PDB4 577 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 SVOPQ8N4V2 548 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 OR8U1Q8NH10 309 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 SETD6Q8TBK2 473 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 KCTD7Q96MP8 289 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 URM1Q9BTM9 101 aaKnown RBP12.43□□□□□ -0.42
CRLF3-203ENST00000578692 LPAR5Q9H1C0 372 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 PLGRKTQ9HBL7 147 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 PIPOXQ9P0Z9 390 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 ZNF580Q9UK33 172 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 SAA2-SAA4A0A096LPE2 208 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 A0A0A6YYD4 124 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 SLC17A2O00624 439 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 SOCS1O15524 211 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 SAA2P0DJI9 122 aaPredicted RBP12.43□□□□□ -0.42
CRLF3-203ENST00000578692 CNTFRP26992 372 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 PSMB8P28062 276 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 RAB25P57735 213 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 P2RY14Q15391 338 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 DEFB136Q30KP8 78 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 FAM89BQ8N5H3 189 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 GFI1Q99684 422 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 CCDC90BQ9GZT6 254 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 IFI27L2Q9H2X8 130 aa12.43□□□□□ -0.42
CRLF3-203ENST00000578692 RIMS4Q9H426 269 aaPredicted RBP12.43□□□□□ -0.42
CRLF3-203ENST00000578692 AK6Q9Y3D8 172 aaKnown RBP12.43□□□□□ -0.42
CRLF3-203ENST00000578692 RAB29O14966 203 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 NBR2O15453 112 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 ST8SIA5O15466 376 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 CPEP16870 476 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 PPIFP30405 207 aaKnown RBP12.42□□□□□ -0.42
CRLF3-203ENST00000578692 RPS25P62851 125 aaKnown RBP12.42□□□□□ -0.42
CRLF3-203ENST00000578692 MLLT11Q13015 90 aaPredicted RBP12.42□□□□□ -0.42
CRLF3-203ENST00000578692 LIN54Q6MZP7 749 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 NPBQ8NG41 125 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 ANKRD60Q9BZ19 345 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 OR51J1Q9H342 316 aa12.42□□□□□ -0.42
CRLF3-203ENST00000578692 ZMAT5Q9UDW3 170 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms