RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 RTN4IP1Q8WWV3 396 aaPredicted RBP16.55■□□□□ 0.24
HCFC1R1-208ENST00000575214 ST6GALNAC6Q969X2 333 aa16.55■□□□□ 0.24
HCFC1R1-208ENST00000575214 ATG5Q9H1Y0 275 aa16.55■□□□□ 0.24
HCFC1R1-208ENST00000575214 Q9N2K0 584 aa16.55■□□□□ 0.24
HCFC1R1-208ENST00000575214 KCNK7Q9Y2U2 307 aa16.55■□□□□ 0.24
HCFC1R1-208ENST00000575214 IGHV3-72A0A0B4J1Y9 119 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 IGKV1D-33P01593 117 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 IGKV1-33P01594 117 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 SNRPBP14678 240 aaKnown RBP16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 TMEM11P17152 192 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 ZNF137PP52743 207 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 HNF4GQ14541 408 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 Q6ZS46 218 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 TGIF2LXQ8IUE1 241 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 LGALS14Q8TCE9 139 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 YIPF6Q96EC8 236 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 MOB4Q9Y3A3 225 aa16.54■□□□□ 0.24
HCFC1R1-208ENST00000575214 TXNL1O43396 289 aa16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 AIREO43918 545 aa16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 PEX14O75381 377 aa16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 HIST1H1DP16402 221 aaKnown RBP16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 VDAC2P45880 294 aaPredicted RBP16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 ABCA11PQ4W5N1 156 aa16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 OR2AK2Q8NG84 335 aa16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 SERTAD4Q9NUC0 356 aa16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 SLC23A1Q9UHI7 598 aa16.53■□□□□ 0.24
HCFC1R1-208ENST00000575214 TRIM64CA6NLI5 447 aa16.52■□□□□ 0.24
HCFC1R1-208ENST00000575214 M0QZK8 103 aa16.52■□□□□ 0.24
HCFC1R1-208ENST00000575214 MFNGO00587 321 aa16.52■□□□□ 0.24
HCFC1R1-208ENST00000575214 HSPA12AO43301 675 aa16.52■□□□□ 0.24
HCFC1R1-208ENST00000575214 TMEM95Q3KNT9 176 aa16.52■□□□□ 0.24
HCFC1R1-208ENST00000575214 LY6G6FQ5SQ64 297 aa16.52■□□□□ 0.24
HCFC1R1-208ENST00000575214 IDNKQ5T6J7 187 aa16.52■□□□□ 0.24
HCFC1R1-208ENST00000575214 SH2D7A6NKC9 451 aaPredicted RBP16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 SERPINE3A8MV23 424 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 SCTP09683 121 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 TGFBR1P36897 503 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 LSM3P62310 102 aaKnown RBP16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 ARFRP1Q13795 201 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 HERPUD1Q15011 391 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 C9orf152Q5JTZ5 239 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 MGAM2Q2M2H8 2515 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 TRDCB7Z8K6 153 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 ST8SIA5O15466 376 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 LANCL1O43813 399 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 FCGR3AP08637 254 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 ARL6IP1Q15041 203 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 PRR31Q5SQ13 230 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 IZUMO1Q8IYV9 350 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 C11orf44Q8N8P7 122 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 OR1A1Q9P1Q5 309 aa16.51■□□□□ 0.23
HCFC1R1-208ENST00000575214 M0QZ24 198 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 SCGNO76038 276 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 AMY1AP04745 511 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 AMY2AP04746 511 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 ZBTB25P24278 435 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 CD1BP29016 333 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 TALDO1P37837 337 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 CEACAM6P40199 344 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 ODF3L1Q8IXM7 274 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 OR2T10Q8NGZ9 312 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 EAF1Q96JC9 268 aaPredicted RBP16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 RHBDL2Q9NX52 303 aa16.5■□□□□ 0.23
HCFC1R1-208ENST00000575214 SAA2-SAA4A0A096LPE2 208 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 ZNF736B4DX44 427 aaPredicted RBP16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 SAA2P0DJI9 122 aaPredicted RBP16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 OR3A3P47888 321 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 SCAND1P57086 179 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 EBI3Q14213 229 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 KIR2DS1Q14954 304 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 CDNFQ49AH0 187 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 OR5H6Q8NGV6 325 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 EDARADDQ8WWZ3 215 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 MAFIPQ8WZ33 124 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 PARP12Q9H0J9 701 aaKnown RBP16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 IFI27L2Q9H2X8 130 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 ETV7Q9Y603 341 aa16.49■□□□□ 0.23
HCFC1R1-208ENST00000575214 NCBP2LA6PVI3 153 aaKnown RBP16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 FABP7O15540 132 aa16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 FGF16O43320 207 aa16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 MOSP00540 346 aa16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 SMIM18P0DKX4 95 aa16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 C5orf56Q8N8D9 126 aa16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 OR4A4PQ8NGN8 299 aa16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 PHF21AQ96BD5 680 aa16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 MRPL20Q9BYC9 149 aaKnown RBP16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 PIPOXQ9P0Z9 390 aa16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 ZNF230Q9UIE0 474 aaPredicted RBP16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 ELF5Q9UKW6 265 aaPredicted RBP16.48■□□□□ 0.23
HCFC1R1-208ENST00000575214 IGKV1-6A0A0C4DH72 117 aa16.47■□□□□ 0.23
HCFC1R1-208ENST00000575214 ITGB1BP1O14713 200 aa16.47■□□□□ 0.23
HCFC1R1-208ENST00000575214 LSAMPQ13449 338 aa16.47■□□□□ 0.23
HCFC1R1-208ENST00000575214 HIST2H2BDQ6DRA6 164 aa16.47■□□□□ 0.23
HCFC1R1-208ENST00000575214 ZNF833PQ6ZTB9 187 aa16.47■□□□□ 0.23
HCFC1R1-208ENST00000575214 FUNDC2Q9BWH2 189 aa16.47■□□□□ 0.23
HCFC1R1-208ENST00000575214 WNT10AQ9GZT5 417 aa16.47■□□□□ 0.23
HCFC1R1-208ENST00000575214 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.47■□□□□ 0.23
HCFC1R1-208ENST00000575214 TRRAPQ9Y4A5 3859 aa16.46■□□□□ 0.23
HCFC1R1-208ENST00000575214 RAB29O14966 203 aa16.46■□□□□ 0.23
HCFC1R1-208ENST00000575214 BET1O15155 118 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms