RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MEOX1P50221 254 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 NDUFA6P56556 154 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HIST1H2BDP58876 126 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HIST1H2BCP62807 126 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 PLP2Q04941 152 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 CLN3Q13286 438 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HIST2H2BEQ16778 126 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 OR2B11Q5JQS5 317 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 DCAF10Q5QP82 559 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 ATP1A1-AS1Q5TC04 95 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 ZNF497Q6ZNH5 498 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 TCTEX1D2Q8WW35 142 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HIST1H2BHQ93079 126 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 RAB40CQ96S21 281 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HIST1H2BNQ99877 126 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HIST1H2BMQ99879 126 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HIPK2Q9H2X6 1198 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 RIMS4Q9H426 269 aaPredicted RBP5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 PLK3Q9H4B4 646 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 PSENENQ9NZ42 101 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 DOK5Q9P104 306 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 IL17BQ9UHF5 180 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 MPC1Q9Y5U8 109 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 DSPP15924 2871 aaKnown RBP5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 UBE2L5PA0A1B0GUS4 154 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 NPIPB11E5RHQ5 1161 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 CYB5BO43169 146 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 RAMP3O60896 148 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 IFNA5P01569 189 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 IGHV2-70P01814 119 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HBE1P02100 147 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 HOXA5P20719 270 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 MDKP21741 143 aaPredicted RBP5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 CD200P41217 278 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 GLIPR1P48060 266 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 KHDC3LQ587J8 217 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 PDZD11Q5EBL8 140 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 PYY3Q5JQD4 70 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 DPPA3Q6W0C5 159 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 BEND4Q6ZU67 534 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 DRAM1Q8N682 238 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 SCCPDHQ8NBX0 429 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 CA5BP1Q8WTZ4 195 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 WDYHV1Q96HA8 205 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 TCEAL7Q9BRU2 100 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 GGACTQ9BVM4 153 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 PKIBQ9C010 78 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 OR2J1Q9GZK6 312 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 OR51M1Q9H341 326 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 UNKLQ9H9P5 680 aaKnown RBP5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 SPRR3Q9UBC9 169 aa5.85□□□□□ -1.47
LINC-ROR-201ENST00000553704 TRAV1-1A0A0B4J248 108 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 TRGC2P03986 189 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 SLC25A6P12236 298 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 RAB2AP61019 212 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 RPS16P62249 146 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 RNFT1Q5M7Z0 435 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 SPANXN5Q5MJ07 72 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 SLC35E3Q7Z769 313 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 C1orf210Q8IVY1 113 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 ZNF610Q8N9Z0 462 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 BCL2L2Q92843 193 aaPredicted RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 LSM10Q969L4 123 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 OR4C12Q96R67 309 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 DDA1Q9BW61 102 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 DEFB127Q9H1M4 99 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 TMPRSS5Q9H3S3 457 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 OPA3Q9H6K4 179 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 TRAPPC2LQ9UL33 140 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 PRR14LQ5THK1 2151 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 URB1O60287 2271 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 PTPRBP23467 1997 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 USF3Q68DE3 2245 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 C19orf67A6NJJ6 358 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 CDIPTO14735 213 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 HMGB3O15347 200 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 PSPNO60542 156 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 SMPD2O60906 423 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 SOD3P08294 240 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 WNT2P09544 360 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 S100GP29377 79 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 MDH2P40926 338 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 ERVK11-1P61568 191 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 RPL30P62888 115 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 LRRC75BQ2VPJ9 315 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 MCEMP1Q8IX19 187 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 LILRB2Q8N423 598 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 OR1L1Q8NH94 360 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 WDR61Q9GZS3 305 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 RBKSQ9H477 322 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 TMEM9BQ9NQ34 198 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 DCAF16Q9NXF7 216 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 CISD1Q9NZ45 108 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 RNF150Q9ULK6 438 aa5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 RBM7Q9Y580 266 aaKnown RBP5.84□□□□□ -1.47
LINC-ROR-201ENST00000553704 DOCK11Q5JSL3 2073 aa5.83□□□□□ -1.48
LINC-ROR-201ENST00000553704 MAP1LC3B2A6NCE7 125 aa5.83□□□□□ -1.48
LINC-ROR-201ENST00000553704 A6NJY4 79 aa5.83□□□□□ -1.48
LINC-ROR-201ENST00000553704 WNT9BO14905 357 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms