RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PARP11Q9NR21 331 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 ZNF256Q9Y2P7 627 aaPredicted RBP8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 EXOSC1Q9Y3B2 195 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 CSMD3Q7Z407 3707 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 SAA2-SAA4A0A096LPE2 208 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 TXNL1O43396 289 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 LY86O95711 162 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 GNAO1P09471 354 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 SAA2P0DJI9 122 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 EGR2P11161 476 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 MYL12AP19105 171 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 CELP19835 753 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 RAB9AP51151 201 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 ZNF616Q08AN1 781 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 GPR176Q14439 515 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 C5orf64Q2M2E5 130 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 C19orf54Q5BKX5 351 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 GLDNQ6ZMI3 551 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 ZNF833PQ6ZTB9 187 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 OVCH2Q7RTZ1 564 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 ZNF555Q8NEP9 628 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 DLX4Q92988 240 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 MRPS24Q96EL2 167 aaKnown RBP8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 UBE2E2Q96LR5 201 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 ZNF251Q9BRH9 671 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 ABHD14AQ9BUJ0 271 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 SPACA1Q9HBV2 294 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 TPSG1Q9NRR2 321 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 ZNF580Q9UK33 172 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 GAB2Q9UQC2 676 aa8.94□□□□□ -0.98
PRPF40B-212ENST00000551111 TRAV41A0A0B4J266 112 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 NBR2O15453 112 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 ST8SIA5O15466 376 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 PDCD6O75340 191 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 HLA-DRB1P01911 266 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 CAPGP40121 348 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 LINC00205P59089 165 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 RUNX1Q01196 453 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 DCTN2Q13561 401 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 RPL39P5Q59GN2 51 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 STEAP3Q658P3 488 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 FAM131AQ6UXB0 335 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 C6orf201Q7Z4U5 140 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 MINDY2Q8NBR6 621 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 NICN1Q9BSH3 213 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 FAAP24Q9BTP7 215 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 IFI27L2Q9H2X8 130 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 FBXL15Q9H469 300 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 CKLFQ9UBR5 152 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 ZMAT5Q9UDW3 170 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 VSIG4Q9Y279 399 aa8.93□□□□□ -0.98
PRPF40B-212ENST00000551111 STARD9Q9P2P6 4700 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 IGHV4OR15-8A0A075B7B6 117 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 A0A087WW49 117 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 A0A0A6YYD4 124 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 FAM90A7PA6NKC0 464 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 FAM90A23PA8MXZ1 464 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 YPEL1O60688 119 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 PROP1O75360 226 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 NDUFA3O95167 84 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 CT45A6P0DMU7 189 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 CT45A5P0DMU8 189 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 CT45A7P0DMV0 189 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 SPNP16150 400 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 CHATP28329 748 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 HTR2CP28335 458 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 HMGN3Q15651 99 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 ECSCRQ19T08 205 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 LIN54Q6MZP7 749 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 TMEM65Q6PI78 240 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 TRAT1Q6PIZ9 186 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 HAPLN4Q86UW8 402 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 NPBQ8NG41 125 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 ABHD14BQ96IU4 210 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 YPEL2Q96QA6 119 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 FAM103A1Q9BTL3 118 aaKnown RBP8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 ISYNA1Q9NPH2 558 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 JPT1Q9UK76 154 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 A3GALT2U3KPV4 340 aa8.92□□□□□ -0.98
PRPF40B-212ENST00000551111 EPPK1P58107 5090 aaKnown RBP8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 A0A1W2PN81 502 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 TRIM64CA6NLI5 447 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 OVOL1O14753 267 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 CA11O75493 328 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 IGHV3-11P01762 117 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 GLAP06280 429 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 OR8U8P0C7N1 319 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 OR5H8P0DN80 308 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 CHRNA7P36544 502 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 CX3CL1P78423 397 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 HTD2P86397 168 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 UNC119Q13432 240 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 TMEM30BQ3MIR4 351 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 AHSA2Q719I0 299 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 LRRTM1Q86UE6 522 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 CDH26Q8IXH8 852 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 IL1F10Q8WWZ1 152 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 LYSTQ99698 3801 aa8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 HDHD3Q9BSH5 251 aaPredicted RBP8.91□□□□□ -0.98
PRPF40B-212ENST00000551111 TOLLIPQ9H0E2 274 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms