RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 FAM90A9PA6NNJ1 464 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 PEX14O75381 377 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 LPLP06858 475 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 CD3GP09693 182 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 CLEC2LP0C7M8 214 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
RAB5C-204ENST00000547517 HIST1H1DP16402 221 aaKnown RBP9.44□□□□□ -0.9
RAB5C-204ENST00000547517 GNB3P16520 340 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 ZNF137PP52743 207 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 HERPUD1Q15011 391 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 STEAP3Q658P3 488 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 TGIF2LXQ8IUE1 241 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 OR10R2Q8NGX6 335 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 LGALS14Q8TCE9 139 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 ST6GALNAC6Q969X2 333 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 ATG5Q9H1Y0 275 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 Q9N2K0 584 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 KCNK7Q9Y2U2 307 aa9.44□□□□□ -0.9
RAB5C-204ENST00000547517 TRRAPQ9Y4A5 3859 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 METTL21EPA6NDL7 271 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 M0QZ24 198 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 RAB27BO00194 218 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 MFNGO00587 321 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 TXNL1O43396 289 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 YPEL1O60688 119 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 RGS11O94810 467 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 AMY1AP04745 511 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 AMY2AP04746 511 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 TIMM50Q3ZCQ8 353 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 C9orf152Q5JTZ5 239 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 THNSL2Q86YJ6 484 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 IZUMO1Q8IYV9 350 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 OR2AK2Q8NG84 335 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 PTX4Q96A99 478 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 YPEL2Q96QA6 119 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 PARP12Q9H0J9 701 aaKnown RBP9.43□□□□□ -0.9
RAB5C-204ENST00000547517 IFI27L2Q9H2X8 130 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 OR1A1Q9P1Q5 309 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 SLC23A1Q9UHI7 598 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 MGAT4AQ9UM21 535 aa9.43□□□□□ -0.9
RAB5C-204ENST00000547517 SAA2-SAA4A0A096LPE2 208 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 ZNF736B4DX44 427 aaPredicted RBP9.42□□□□□ -0.9
RAB5C-204ENST00000547517 M0QZK8 103 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 ST8SIA5O15466 376 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 HSPA12AO43301 675 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 LANCL1O43813 399 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 AIREO43918 545 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 FCGR3AP08637 254 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 SCTP09683 121 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 SAA2P0DJI9 122 aaPredicted RBP9.42□□□□□ -0.9
RAB5C-204ENST00000547517 TGFBR1P36897 503 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 IDNKQ5T6J7 187 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 C5orf56Q8N8D9 126 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 MAFIPQ8WZ33 124 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 RBMXL1Q96E39 390 aaKnown RBP9.42□□□□□ -0.9
RAB5C-204ENST00000547517 YIPF6Q96EC8 236 aa9.42□□□□□ -0.9
RAB5C-204ENST00000547517 MRPL20Q9BYC9 149 aaKnown RBP9.42□□□□□ -0.9
RAB5C-204ENST00000547517 SERPINE3A8MV23 424 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 TRDCB7Z8K6 153 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 FBXO24O75426 580 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 TSPAN15O95858 294 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 ZBTB25P24278 435 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 OR3A3P47888 321 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 LSM3P62310 102 aaKnown RBP9.41□□□□□ -0.9
RAB5C-204ENST00000547517 LSAMPQ13449 338 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 ARFRP1Q13795 201 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 C2orf68Q2NKX9 166 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 TREML4Q6UXN2 200 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 ODF3L1Q8IXM7 274 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 OR2T10Q8NGZ9 312 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 EAF1Q96JC9 268 aaPredicted RBP9.41□□□□□ -0.9
RAB5C-204ENST00000547517 WNT10AQ9GZT5 417 aa9.41□□□□□ -0.9
RAB5C-204ENST00000547517 IGKV1-6A0A0C4DH72 117 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 TRIM64CA6NLI5 447 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 NCBP2LA6PVI3 153 aaKnown RBP9.4□□□□□ -0.9
RAB5C-204ENST00000547517 FABP7O15540 132 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 MOSP00540 346 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 SMIM18P0DKX4 95 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 CD28P10747 220 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 CD1BP29016 333 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 TALDO1P37837 337 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 CEACAM6P40199 344 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 EBI3Q14213 229 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 LY6G6FQ5SQ64 297 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 ZNF833PQ6ZTB9 187 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 Q8N6K4 173 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 OR5H6Q8NGV6 325 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 RHBDL2Q9NX52 303 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 ZNF230Q9UIE0 474 aaPredicted RBP9.4□□□□□ -0.9
RAB5C-204ENST00000547517 ELF5Q9UKW6 265 aaPredicted RBP9.4□□□□□ -0.9
RAB5C-204ENST00000547517 ETV7Q9Y603 341 aa9.4□□□□□ -0.9
RAB5C-204ENST00000547517 TET2Q6N021 2002 aaPredicted RBP9.39□□□□□ -0.91
RAB5C-204ENST00000547517 TMEM235A6NFC5 223 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 RAB29O14966 203 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 BET1O15155 118 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 FGF16O43320 207 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 SCGNO76038 276 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 CSF1P09603 554 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 SCAND1P57086 179 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 KIR2DS1Q14954 304 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms