RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 RPP25LQ8N5L8 163 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 UBALD1Q8TB05 177 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 RDH5Q92781 318 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 ETV2O00321 342 aaPredicted RBP10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 BCL3P20749 454 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 C11orf42Q8N5U0 333 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 CPEB3Q8NE35 698 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 DNASE2BQ8WZ79 361 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 LPAR2Q9HBW0 351 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 KIR2DL5BA0A0G2JN68 375 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 KIR2DL5BA0A0G2JPC4 375 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 A0A1W2PPC4 97 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 TP53I11O14683 189 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 GALR2O43603 387 aaPredicted RBP10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 DUX1O43812 170 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 CD82P27701 267 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 KIR2DL5AQ8N109 375 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 RNASE8Q8TDE3 154 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 NABP1Q96AH0 204 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 HSPB9Q9BQS6 159 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 ABCA7Q8IZY2 2146 aa10.98□□□□□ -0.65
SFSWAP-209ENST00000540469 URB1O60287 2271 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 C1QTNF9BB2RNN3 333 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 C11orf94C9JXX5 98 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 C5orf67F2Z3F1 127 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 ZNHIT1O43257 154 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 WDR1O75083 606 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 CTXN2P0C2S0 81 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 OTX1P32242 354 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 TCF23Q7RTU1 214 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 AGMATQ9BSE5 352 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 FAM103A1Q9BTL3 118 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 OR2J1Q9GZK6 312 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 TMEM9BQ9NQ34 198 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 FAM186AA6NE01 2351 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 MDFIC2A0A1B0GVS7 189 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 MRPS11P82912 194 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 Q6ZRM9 215 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 PSMF1Q92530 271 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 MIEN1Q9BRT3 115 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 CTXND1A0A1B0GTU2 59 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 TRAPPC2LH3BP13 241 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 AQP7O14520 342 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 LINC00614P0C842 121 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 MPLP40238 635 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 C10orf128Q5T292 105 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 Q6ZVH6 145 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 ZDHHC23Q8IYP9 409 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 HLA-CQ95604 372 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 IL36RNQ9UBH0 155 aa10.97□□□□□ -0.65
SFSWAP-209ENST00000540469 PIGBOS1A0A0B4J2F0 54 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 TUSC2O75896 110 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 DEFA4P12838 97 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 GPM6AP51674 278 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 MAJINQ3KP22 176 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 ASCL3Q9NQ33 180 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 LOC102724200A0A096LPH7 203 aaPredicted RBP10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 NUPR1O60356 82 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 IGKV1D-33P01593 117 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 IGKV1-33P01594 117 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 CCR5P51681 352 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 KRTDAPP60985 99 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 COL5A1-AS1Q5SY13 56 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 MKXQ8IYA7 352 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 CLDN23Q96B33 292 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 BTF3L4Q96K17 158 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 TMEM106BQ9NUM4 274 aa10.96□□□□□ -0.65
SFSWAP-209ENST00000540469 TTC28Q96AY4 2481 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 TRAV39A0A0B4J263 110 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 LILRA1O75019 489 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 SERPINA7P05543 415 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 COX5AP20674 150 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 KITLGP21583 273 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 RANP62826 216 aaKnown RBP10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 TDRG1Q3Y452 100 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 FAM27BQ5VT28 67 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 VHLLQ6RSH7 139 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 TXN2Q99757 166 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 HIPK2Q9H2X6 1198 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 CD207Q9UJ71 328 aa10.96□□□□□ -0.66
SFSWAP-209ENST00000540469 LOC102725191A0A1B0GVB3 256 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 TNFSF11O14788 317 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 VAMP5O95183 116 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 CD38P28907 300 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 BRS3P32247 399 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 CLDN15P56746 228 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 SLC25A53Q5H9E4 307 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 WDYHV1Q96HA8 205 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 PGPEP1LA6NFU8 196 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 RAB7AP51149 207 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 LCN2P80188 198 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 ACSM6Q6P461 480 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 SPACA9Q96E40 222 aaPredicted RBP10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 FOXJ2Q9P0K8 574 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 MMP17Q9ULZ9 603 aa10.95□□□□□ -0.66
SFSWAP-209ENST00000540469 OR2W1Q9Y3N9 320 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms