RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 TPTE2P1Q5T6R2 138 aa11.15□□□□□ -0.62
CCND1-204ENST00000539241 MZT2AQ6P582 158 aa11.15□□□□□ -0.62
CCND1-204ENST00000539241 SAMD12Q8N8I0 201 aa11.15□□□□□ -0.62
CCND1-204ENST00000539241 CREB3L1Q96BA8 519 aa11.15□□□□□ -0.62
CCND1-204ENST00000539241 CMTM3Q96MX0 182 aa11.15□□□□□ -0.62
CCND1-204ENST00000539241 FAAP24Q9BTP7 215 aa11.15□□□□□ -0.62
CCND1-204ENST00000539241 PECRQ9BY49 303 aa11.15□□□□□ -0.62
CCND1-204ENST00000539241 ABCG5Q9H222 651 aa11.15□□□□□ -0.62
CCND1-204ENST00000539241 TSSC4Q9Y5U2 329 aaPredicted RBP11.15□□□□□ -0.62
CCND1-204ENST00000539241 SH2D7A6NKC9 451 aaPredicted RBP11.14□□□□□ -0.63
CCND1-204ENST00000539241 BUB1B-PAK6H3BSN5 160 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 MFNGO00587 321 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 PF4P02776 101 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 MT-ND4P03905 459 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
CCND1-204ENST00000539241 GLP1RP43220 463 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 PRRX1P54821 245 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 CCDC144NLQ6NUI1 221 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 ZNF565Q8N9K5 539 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 OR4X2Q8NGF9 303 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCND1-204ENST00000539241 COMMD3Q9UBI1 195 aa11.14□□□□□ -0.63
CCND1-204ENST00000539241 A0A087X0M5 115 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 A0A1B0GX30 115 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 ZNF729A6NN14 1252 aaPredicted RBP11.13□□□□□ -0.63
CCND1-204ENST00000539241 SERPINE3A8MV23 424 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 OOSP1A8MZH6 123 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 LY6LH3BQJ8 138 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 NAPSAO96009 420 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 APOA1P02647 267 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 AMY1AP04745 511 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 AMY2AP04746 511 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 NFYBP25208 207 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 MNDAP41218 407 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 C17orf58Q2M2W7 97 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 KHDC1LQ5JSQ8 128 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 C9orf152Q5JTZ5 239 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 OR13A1Q8NGR1 328 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 MRPL30Q8TCC3 161 aaKnown RBP11.13□□□□□ -0.63
CCND1-204ENST00000539241 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
CCND1-204ENST00000539241 S100A16Q96FQ6 103 aaKnown RBP11.13□□□□□ -0.63
CCND1-204ENST00000539241 CYYR1Q96J86 154 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
CCND1-204ENST00000539241 AK3Q9UIJ7 227 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 KCNK7Q9Y2U2 307 aa11.13□□□□□ -0.63
CCND1-204ENST00000539241 KBTBD11-OT1A0A1B0GTJ5 212 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 M0QZK8 103 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 GSTP1P09211 210 aaKnown RBP11.12□□□□□ -0.63
CCND1-204ENST00000539241 CGB3P0DN86 165 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 CGB7P0DN87 165 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 GNB3P16520 340 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 UTF1Q5T230 341 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 C6orf183Q5T699 404 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 TRAT1Q6PIZ9 186 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 MOB1BQ7L9L4 216 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 OR4K15Q8NH41 348 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 OR9G1Q8NH87 305 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 MRGPRDQ8TDS7 321 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 CCDC107Q8WV48 283 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 RPEQ96AT9 228 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 KIRREL1Q96J84 757 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 CMSS1Q9BQ75 279 aaKnown RBP11.12□□□□□ -0.63
CCND1-204ENST00000539241 SLIRPQ9GZT3 109 aaKnown RBP11.12□□□□□ -0.63
CCND1-204ENST00000539241 LINC00574Q9H8X3 128 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 DIABLOQ9NR28 239 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 TRAPPC2LQ9UL33 140 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
CCND1-204ENST00000539241 A0A075B6Q4 140 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 TRBV6-6A0A0A6YYG2 114 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 ORC5O43913 435 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 HPGDSO60760 199 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 EIF4EP06730 217 aaKnown RBP11.11□□□□□ -0.63
CCND1-204ENST00000539241 CD3GP09693 182 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 FAM106CPP0CH98 169 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 GZMHP20718 246 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 MRPS15P82914 257 aaKnown RBP11.11□□□□□ -0.63
CCND1-204ENST00000539241 ZNF554Q86TJ5 538 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 TOMM40LQ969M1 308 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 RCC1LQ96I51 464 aaKnown RBP11.11□□□□□ -0.63
CCND1-204ENST00000539241 DCUN1D5Q9BTE7 237 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 CHMP1AQ9HD42 196 aaPredicted RBP11.11□□□□□ -0.63
CCND1-204ENST00000539241 RAB9BQ9NP90 201 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 MBNL3Q9NUK0 354 aaKnown RBP11.11□□□□□ -0.63
CCND1-204ENST00000539241 CALYQ9NYX4 217 aa11.11□□□□□ -0.63
CCND1-204ENST00000539241 AMMECR1Q9Y4X0 333 aaPredicted RBP11.11□□□□□ -0.63
CCND1-204ENST00000539241 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 TRAV18A0A075B6X5 111 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 TRAV39A0A0B4J263 110 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 FAM90A9PA6NNJ1 464 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 NPIPB11E5RHQ5 1161 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 J3QR06 171 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 XRCC3O43542 346 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 IGHV3-7P01780 117 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 SSTR5P35346 364 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 ARFRP1Q13795 201 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 PNLIPRP3Q17RR3 467 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 ZNF260Q3ZCT1 412 aa11.1□□□□□ -0.63
CCND1-204ENST00000539241 CDNFQ49AH0 187 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms