RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PPP1CCP36873 323 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ACTBP60709 375 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ZNF260Q3ZCT1 412 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 BPIFB6Q8NFQ5 453 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 MRPL30Q8TCC3 161 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 THRSPQ92748 146 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ZNF251Q9BRH9 671 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 UQCC2Q9BRT2 126 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 OR51J1Q9H342 316 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 FKBP14Q9NWM8 211 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 GHRLQ9UBU3 117 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 WSB1Q9Y6I7 421 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 G3V318 75 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 RGS11O94810 467 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 HLA-DRB1P01911 266 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 CD1AP06126 327 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 CELP19835 753 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 MAPK3P27361 379 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 HTD2P86397 168 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 AHSA2Q719I0 299 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ODF3L1Q8IXM7 274 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ZNF491Q8N8L2 437 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 FAM46BQ96A09 425 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 GALMQ96C23 342 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 CYYR1Q96J86 154 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 RITA1Q96K30 269 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 NABP2Q9BQ15 211 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 MRPL20Q9BYC9 149 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 CST11Q9H112 138 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 KLK15Q9H2R5 256 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 VSIG4Q9Y279 399 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ZNF256Q9Y2P7 627 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 SORL1Q92673 2214 aa15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 HUWE1Q7Z6Z7 4374 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1B-204ENST00000536782 MYL12BO14950 172 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ATP6V0E1O15342 81 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 NBR2O15453 112 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 YPEL1O60688 119 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 OR8U8P0C7N1 319 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 CNTFRP26992 372 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 KIAA0141Q14154 515 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 NKAPLQ5M9Q1 402 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 RNLSQ5VYX0 342 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 C5orf24Q7Z6I8 188 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 OR1N2Q8NGR9 330 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 YPEL2Q96QA6 119 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 GNB4Q9HAV0 340 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 PARP11Q9NR21 331 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 LRRC42Q9Y546 428 aa15.32■□□□□ 0.04
TNFRSF1B-204ENST00000536782 TRAV41A0A0B4J266 112 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 I3L521 148 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 IGLV1-40P01703 118 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 INSL3P51460 131 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 WNT4P56705 351 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 RUNX1Q01196 453 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ZNF616Q08AN1 781 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 LY6G6FQ5SQ64 297 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 C6orf141Q5SZD1 244 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 LIN54Q6MZP7 749 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ZNF833PQ6ZTB9 187 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 OR2AK2Q8NG84 335 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 NEDD4LQ96PU5 975 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ANKRD60Q9BZ19 345 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 KIAA1456Q9P272 454 aa15.31■□□□□ 0.04
TNFRSF1B-204ENST00000536782 IGHV7-81A0A0B4J1V7 117 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 UBBP0CG47 229 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 OR3A3P47888 321 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 HSPA13P48723 471 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 RAB9AP51151 201 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 C5orf64Q2M2E5 130 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 NPBQ8NG41 125 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 OR5B12Q96R08 314 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 SCN3BQ9NY72 215 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ABRACLQ9P1F3 81 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ERGIC3Q9Y282 383 aa15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 DYNC2H1Q8NCM8 4307 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1B-204ENST00000536782 SAA2-SAA4A0A096LPE2 208 aa15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 CDK1P06493 297 aa15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 SAA2P0DJI9 122 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 CHATP28329 748 aa15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 BLVRBP30043 206 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 HMGN3Q15651 99 aa15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ASPHD1Q5U4P2 390 aa15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 NANOGP1Q8N7R0 232 aa15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 SULT4A1Q9BR01 284 aa15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 STEAP1Q9UHE8 339 aa15.29■□□□□ 0.04
TNFRSF1B-204ENST00000536782 NDUFA3O95167 84 aa15.28■□□□□ 0.04
TNFRSF1B-204ENST00000536782 LY86O95711 162 aa15.28■□□□□ 0.04
TNFRSF1B-204ENST00000536782 GNB1P62873 340 aa15.28■□□□□ 0.04
TNFRSF1B-204ENST00000536782 MINDY2Q8NBR6 621 aa15.28■□□□□ 0.04
TNFRSF1B-204ENST00000536782 IL1F10Q8WWZ1 152 aa15.28■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ASCL2Q99929 193 aa15.28■□□□□ 0.04
TNFRSF1B-204ENST00000536782 FAAP24Q9BTP7 215 aa15.28■□□□□ 0.04
TNFRSF1B-204ENST00000536782 IFI27L2Q9H2X8 130 aa15.28■□□□□ 0.04
TNFRSF1B-204ENST00000536782 RPS27AP62979 156 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 ACSM3Q53FZ2 586 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 GLT8D1Q68CQ7 371 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 OR10K2Q6IF99 312 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 FAM71F2Q6NXP2 309 aa15.27■□□□□ 0.04
TNFRSF1B-204ENST00000536782 C6orf201Q7Z4U5 140 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms