RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 LINC01006Q8NI28 216 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 CFHR4Q92496 578 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 ABHD14AQ9BUJ0 271 aa18.22■□□□□ 0.51
SFSWAP-204ENST00000535399 IGKV1-6A0A0C4DH72 117 aa18.21■□□□□ 0.51
SFSWAP-204ENST00000535399 RGS11O94810 467 aa18.21■□□□□ 0.51
SFSWAP-204ENST00000535399 GAPDHP04406 335 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-204ENST00000535399 IL3RAP26951 378 aa18.21■□□□□ 0.51
SFSWAP-204ENST00000535399 REG1BP48304 166 aa18.21■□□□□ 0.51
SFSWAP-204ENST00000535399 ARFRP1Q13795 201 aa18.21■□□□□ 0.51
SFSWAP-204ENST00000535399 C3orf56Q8N813 242 aa18.21■□□□□ 0.51
SFSWAP-204ENST00000535399 OR56B4Q8NH76 319 aa18.21■□□□□ 0.51
SFSWAP-204ENST00000535399 GSTP1P09211 210 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 HACD4Q5VWC8 232 aa18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 THNSL2Q86YJ6 484 aa18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 CAPSLQ8WWF8 208 aa18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 RTN4IP1Q8WWV3 396 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 ZNF747Q9BV97 191 aa18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 NPFFR1Q9GZQ6 430 aa18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 PARP12Q9H0J9 701 aaKnown RBP18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 RANBP3Q9H6Z4 567 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 OR1A1Q9P1Q5 309 aa18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 SLC23A1Q9UHI7 598 aa18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 ZNF230Q9UIE0 474 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-204ENST00000535399 A0A0A6YYH2 397 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 IGHV1-3A0A0C4DH29 117 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 TMEM235A6NFC5 223 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 A6NJ64 397 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 HABP2Q14520 560 aaPredicted RBP18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 HERPUD1Q15011 391 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 ODF3L1Q8IXM7 274 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 LYG1Q8N1E2 194 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 MAFIPQ8WZ33 124 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 ABCG5Q9H222 651 aa18.19■□□□□ 0.5
SFSWAP-204ENST00000535399 FABP7O15540 132 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 SNRNP70P08621 437 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 FAM106CPP0CH98 169 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 DTYMKP23919 212 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 TALDO1P37837 337 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 KIR2DS4P43632 304 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 PROK1P58294 105 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 SRSF7Q16629 238 aaKnown RBP eCLIP18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 Q6ZS49 121 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 C16orf82Q7Z2V1 217 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 OR2AK2Q8NG84 335 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 OR4A4PQ8NGN8 299 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 OR4C13Q8NGP0 309 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 KCTD12Q96CX2 325 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 IFI27L2Q9H2X8 130 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 RNF114Q9Y508 228 aa18.18■□□□□ 0.5
SFSWAP-204ENST00000535399 TRAV18A0A075B6X5 111 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 ITGB1BP1O14713 200 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 LANCL1O43813 399 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 GSTT2P0CG29 244 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 GSTT2BP0CG30 244 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 ZBTB25P24278 435 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 KIR2DS1Q14954 304 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 PNLIPRP3Q17RR3 467 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 MOB3BQ86TA1 216 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 NUDCD2Q8WVJ2 157 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 PHF21AQ96BD5 680 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 RBM14Q96PK6 669 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 CABLES2Q9BTV7 478 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 ZNF702PQ9H963 129 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 SIGLEC9Q9Y336 463 aa18.17■□□□□ 0.5
SFSWAP-204ENST00000535399 IGKV1D-8A0A087WSZ0 117 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 IGHV3-72A0A0B4J1Y9 119 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 ST8SIA5O15466 376 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 HSPA12AO43301 675 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 SSX5O60225 188 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 OR2F2O95006 317 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 CEACAM6P40199 344 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 RPL5P46777 297 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 PITPNAQ00169 270 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 UBE2NLQ5JXB2 153 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 TGIF2LXQ8IUE1 241 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 IZUMO1Q8IYV9 350 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 Q8N2B8 174 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 WFDC12Q8WWY7 111 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 SLC25A33Q9BSK2 321 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 DCSTAMPQ9H295 470 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 DIABLOQ9NR28 239 aa18.16■□□□□ 0.5
SFSWAP-204ENST00000535399 TXNL1O43396 289 aa18.15■□□□□ 0.5
SFSWAP-204ENST00000535399 GNG2P59768 71 aa18.15■□□□□ 0.5
SFSWAP-204ENST00000535399 BLCAPP62952 87 aa18.15■□□□□ 0.5
SFSWAP-204ENST00000535399 EBI3Q14213 229 aa18.15■□□□□ 0.5
SFSWAP-204ENST00000535399 IGSF11Q5DX21 431 aa18.15■□□□□ 0.5
SFSWAP-204ENST00000535399 SAMD12Q8N8I0 201 aa18.15■□□□□ 0.5
SFSWAP-204ENST00000535399 TOLLIPQ9H0E2 274 aa18.15■□□□□ 0.5
SFSWAP-204ENST00000535399 C11orf54Q9H0W9 315 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-204ENST00000535399 SAA2-SAA4A0A096LPE2 208 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 DIRAS3O95661 229 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 IGKV1D-33P01593 117 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 IGKV1-33P01594 117 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 LPLP06858 475 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 SAA2P0DJI9 122 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 OR3A3P47888 321 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 RORCP51449 518 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 Q6ZS46 218 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 ZNF833PQ6ZTB9 187 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 CLVS1Q8IUQ0 354 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms