RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SVBPQ8N300 66 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 LRRC18Q8N456 261 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 STPG4Q8N801 248 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 UBAC2Q8NBM4 344 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 RELL2Q8NC24 303 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 OR1S2Q8NGQ3 325 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 LYPD6BQ8NI32 183 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 FNDC9Q8TBE3 224 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PCNPQ8WW12 178 aaKnown RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 SLAMF9Q96A28 289 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 REEP6Q96HR9 211 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 ZNF75AQ96N20 296 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 SPACA5Q96QH8 159 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 NKX3-1Q99801 234 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 CITED2Q99967 270 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 CMSS1Q9BQ75 279 aaKnown RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 ZNF2Q9BSG1 426 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 SRXN1Q9BYN0 137 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 NKX6-2Q9C056 277 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 STRADBQ9C0K7 418 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 OR2H1Q9GZK4 316 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 WNT5BQ9H1J7 359 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 WDR13Q9H1Z4 485 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 ARV1Q9H2C2 271 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 RIMS4Q9H426 269 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 SMDT1Q9H4I9 107 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 NAA60Q9H7X0 242 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 METTL8Q9H825 291 aaKnown RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 AKIRIN1Q9H9L7 192 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 ZNF286AQ9HBT8 521 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 C12orf4Q9NQ89 552 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 ZC4H2Q9NQZ6 224 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PARP11Q9NR21 331 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PLEKHJ1Q9NW61 149 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 MYEF2Q9P2K5 600 aaKnown RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 ZNF629Q9UEG4 869 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 PURGQ9UJV8 347 aaKnown RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 BOKQ9UMX3 212 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 NSG2Q9Y328 171 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 KMT2EQ8IZD2 1858 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 BORCS7-ASMTA0A0B4J1R7 106 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 LRP5LA4QPB2 252 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 C21orf140B9A014 251 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 DNASE2O00115 360 aaPredicted RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 LGALS8O00214 317 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 UBE2CO00762 179 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 CXCL13O43927 109 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 SS18L1O75177 396 aaPredicted RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 MRPL33O75394 65 aaKnown RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 SCO1O75880 301 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 DIRAS3O95661 229 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 CDS2O95674 445 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 APOC3P02656 99 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 OPN1LWP04000 364 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 CD5P06127 495 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 FCGR3AP08637 254 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 ZNF728P0DKX0 622 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 LIPCP11150 499 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 SLC25A6P12236 298 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 CCL4P13236 92 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 ZNF708P17019 499 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 ZNF32P17041 273 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 TCN2P20062 427 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 KLK2P20151 261 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 IL32P24001 234 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 ACKR3P25106 362 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 PAX6P26367 422 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 RPL12P30050 165 aaKnown RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 PTGER4P35408 488 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 ARR3P36575 388 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 GLP1RP43220 463 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 HTR5AP47898 357 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 P2RY1P47900 373 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 CYB561P49447 251 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 CAV2P51636 162 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 UCP2P55851 309 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 MTCP1P56278 107 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 RBM11P57052 281 aaKnown RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 SIGLEC14Q08ET2 396 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 BTN1A1Q13410 526 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 SLC9A3R2Q15599 337 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 HYAL4Q2M3T9 481 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 IAH1Q2TAA2 248 aaPredicted RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 CEACAM16Q2WEN9 425 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 SNAI3Q3KNW1 292 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 LRRC37A5PQ49AS3 106 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 ACER2Q5QJU3 275 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 BTNL8Q6UX41 500 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 C6orf201Q7Z4U5 140 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 SKA3Q8IX90 412 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 MKXQ8IYA7 352 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 BPIFCQ8NFQ6 507 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 OR8G5Q8NG78 346 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 OR5A2Q8NGI9 324 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 OR10D3Q8NH80 312 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 IL22RA2Q969J5 263 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 MOB3AQ96BX8 217 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 OR10C1Q96KK4 312 aa3.12□□□□□ -1.91
CAST-242ENST00000515063 TSNAXQ99598 290 aaKnown RBP3.12□□□□□ -1.91
CAST-242ENST00000515063 SPIN2AQ99865 258 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 232.7 ms