RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SSR3Q9UNL2 185 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 TSPAN15O95858 294 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 TMEM11P17152 192 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 RAB6AP20340 208 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 CENPVQ7Z7K6 275 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 TGIF2LXQ8IUE1 241 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 LYG1Q8N1E2 194 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 C5orf56Q8N8D9 126 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 OR5AU1Q8NGC0 362 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 PTX4Q96A99 478 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 RBMXL1Q96E39 390 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 ABRACLQ9P1F3 81 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 MOB4Q9Y3A3 225 aa12.81□□□□□ -0.36
PDLIM5-212ENST00000509333 NOTOA8MTQ0 251 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 FGF16O43320 207 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 PEX14O75381 377 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 RGS11O94810 467 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 CSF1P09603 554 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 SCTP09683 121 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 CD83Q01151 205 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 NEDD8Q15843 81 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 IZUMO1Q8IYV9 350 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 OR10R2Q8NGX6 335 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 SETD6Q8TBK2 473 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 IL1F10Q8WWZ1 152 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 RAB3CQ96E17 227 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 CMSS1Q9BQ75 279 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 NOTCH1P46531 2555 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 NOTCH3Q9UM47 2321 aa12.8□□□□□ -0.36
PDLIM5-212ENST00000509333 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 LINC01548A6NM66 108 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 ITGB1BP1O14713 200 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 FBXO24O75426 580 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 CD36P16671 472 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 SDC2P34741 201 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 CEACAM6P40199 344 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 OR3A3P47888 321 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 C2orf68Q2NKX9 166 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 ARSJQ5FYB0 599 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 TCTEX1D4Q5JR98 221 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 C9orf152Q5JTZ5 239 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 KCTD7Q96MP8 289 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 CITED2Q99967 270 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 ZNF251Q9BRH9 671 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 CHCHD6Q9BRQ6 235 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 AGMATQ9BSE5 352 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 ABHD14AQ9BUJ0 271 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 RNF167Q9H6Y7 350 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 MGAT4AQ9UM21 535 aa12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 TET2Q6N021 2002 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-212ENST00000509333 IGKV1-6A0A0C4DH72 117 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 METTL21EPA6NDL7 271 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 TRDCB7Z8K6 153 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 TXNL1O43396 289 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 MOSP00540 346 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 GNB3P16520 340 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 GADD45AP24522 165 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 F2RL1P55085 397 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 ZNF833PQ6ZTB9 187 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 Q8N9W7 124 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 RITA1Q96K30 269 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 NABP2Q9BQ15 211 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 PARP12Q9H0J9 701 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 C11orf54Q9H0W9 315 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 C12orf4Q9NQ89 552 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 SLC23A1Q9UHI7 598 aa12.78□□□□□ -0.36
PDLIM5-212ENST00000509333 NCBP2LA6PVI3 153 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 MFNGO00587 321 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 PROP1O75360 226 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 IGHG2P01859 326 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 CD3GP09693 182 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 ZBTB25P24278 435 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 C10orf99Q6UWK7 81 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 NDUFA11Q86Y39 141 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 OR2AK2Q8NG84 335 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 S1PR3Q99500 378 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 CENPOQ9BU64 300 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 TOLLIPQ9H0E2 274 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 IFI27L2Q9H2X8 130 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 GHITMQ9H3K2 345 aa12.77□□□□□ -0.37
PDLIM5-212ENST00000509333 A0A087WXM4 84 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 ST8SIA5O15466 376 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 HIST1H1DP16402 221 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 HLA-DRB3P79483 266 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 LSAMPQ13449 338 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 NSUN5P1Q3KNT7 163 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 CDNFQ49AH0 187 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 OR8H1Q8NGG4 311 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 ATG5Q9H1Y0 275 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 ABCG5Q9H222 651 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 PIPOXQ9P0Z9 390 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 OR1A1Q9P1Q5 309 aa12.76□□□□□ -0.37
PDLIM5-212ENST00000509333 DAPK2Q9UIK4 370 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms