RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RGS5O15539 181 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 EEF1E1O43324 174 aaKnown RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 GCM2O75603 506 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 IFNA14P01570 189 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGKV2D-28P01615 120 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 APCSP02743 223 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 REG1AP05451 166 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 FBP1P09467 338 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 KCNE1P15382 129 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 CBR1P16152 277 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF708P17019 499 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 IMPA1P29218 277 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 REG1BP48304 166 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 INPP1P49441 399 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 PSMB3P49720 205 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 NUDT2P50583 147 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 GZMMP51124 257 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 RAB4BP61018 213 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 RPS24P62847 133 aaKnown RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 HLA-DRB3P79483 266 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ATP5G2Q06055 141 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 EIF4EBP1Q13541 118 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 PMAIP1Q13794 54 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 JOSD1Q15040 202 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 CDK10Q15131 360 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 SNRNP35Q16560 246 aaKnown RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ABCA11PQ4W5N1 156 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 MESTQ5EB52 335 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 TEX30Q5JUR7 227 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 Q6ZR03 302 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 Q6ZRU5 148 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF550Q7Z398 422 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 FAM19A3Q7Z5A8 133 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 DOLPP1Q86YN1 238 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF695Q8IW36 515 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 C20orf196Q8IYI0 205 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ORMDL3Q8N138 153 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 TMEM86BQ8N661 226 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF676Q8N7Q3 588 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZDHHC22Q8N966 263 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR2Z1Q8NG97 314 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR8A1Q8NGG7 326 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR8S1Q8NH09 359 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 FAM57AQ8TBR7 257 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 KCTD4Q8WVF5 259 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 RASSF5Q8WWW0 418 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 YIPF5Q969M3 257 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 APOBEC3DQ96AK3 386 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 GALMQ96C23 342 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZHX1-C8orf76Q96EF9 292 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ACY3Q96HD9 319 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 DIRAS2Q96HU8 199 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 C18orf15Q96N68 181 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 CDX2Q99626 313 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 CMSS1Q9BQ75 279 aaKnown RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 DDA1Q9BW61 102 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 GNB1LQ9BYB4 327 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 PCBD2Q9H0N5 130 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 FAM96AQ9H5X1 160 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 C8orf17Q9NRJ1 99 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 CYTL1Q9NRR1 136 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ARMC1Q9NVT9 282 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ANGPT4Q9Y264 503 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 BTRCQ9Y297 605 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 PRELID3BQ9Y3B1 194 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 FIS1Q9Y3D6 152 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 FAM32AQ9Y421 112 aaKnown RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 CAMSAP1Q5T5Y3 1602 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 NPATQ14207 1427 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 NCOA1Q15788 1441 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ADAMTS13Q76LX8 1427 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 C2orf16Q68DN1 1984 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGLV4-60A0A075B6I1 120 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHV1-45A0A0A0MS14 117 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGKV6-21A0A0C4DH24 114 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 A0A1B0GV72 72 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 TMEM223A0PJW6 202 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 GOLGA6L4A6NEF3 574 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR4C46A6NHA9 309 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 A8MWL6 223 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 H0YJW9 148 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 K7EQS6 105 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 ISLRO14498 428 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 BHLHE40O14503 412 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 STK16O75716 305 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 CDRT1O95170 752 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 CXorf1O96002 111 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 IFNA1P01562 189 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 IFNA21P01568 189 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 TTRP02766 147 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR56A5P0C7T3 313 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR12D1P0DN82 309 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 IFI30P13284 250 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 GTF2F2P13984 249 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 CTLA4P16410 223 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 HIST1H1TP22492 207 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 MPIP34949 423 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 CRYBA4P53673 196 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 GABARAPL2P60520 117 aa1.45□□□□□ -2.18
HMGB1P35-201ENST00000503360 ESRRGP62508 458 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms