RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 BEST4Q8NFU0 473 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 OR10X1Q8NGY0 326 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 CT45A3Q8NHU0 189 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 SNAPC3Q92966 411 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 ABHD1Q96SE0 405 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 ABHD14AQ9BUJ0 271 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 TOLLIPQ9H0E2 274 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 MEGF9Q9H1U4 602 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 IFT46Q9NQC8 304 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 SLC23A1Q9UHI7 598 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 MEIS3P1A6NDR6 274 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 OOSP1A8MZH6 123 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 ITGB1BP1O14713 200 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 BET1O15155 118 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 HSPA12AO43301 675 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 TCF21O43680 179 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 NAT1P18440 290 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 ZNF134P52741 427 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 TPTE2P1Q5T6R2 138 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 PYHIN1Q6K0P9 492 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 Q6YL49 198 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 OR2AK2Q8NG84 335 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 EDARADDQ8WWZ3 215 aa11.69□□□□□ -0.54
USP11-212ENST00000497179 PARP12Q9H0J9 701 aaKnown RBP11.69□□□□□ -0.54
USP11-212ENST00000497179 CTXN2P0C2S0 81 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 IL3RAP26951 378 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 S100A5P33763 92 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 CEACAM6P40199 344 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 ZNF137PP52743 207 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 MRPS10P82664 201 aaKnown RBP11.68□□□□□ -0.54
USP11-212ENST00000497179 SSX2Q16385 188 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 AANATQ16613 207 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 TMEM86BQ8N661 226 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 OR10J5Q8NHC4 309 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 JMJD8Q96S16 334 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 SOSTQ9BQB4 213 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 IFI27L2Q9H2X8 130 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 ESM1Q9NQ30 184 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 RDH8Q9NYR8 311 aa11.68□□□□□ -0.54
USP11-212ENST00000497179 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 VGLL3A8MV65 326 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 CTDSPLO15194 276 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 HOXA3O43365 443 aaPredicted RBP11.67□□□□□ -0.54
USP11-212ENST00000497179 PAX6P26367 422 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 RCVRNP35243 200 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 RAB7AP51149 207 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 ARPC4P59998 168 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 BAMBIQ13145 260 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 IL18Q14116 193 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 LRRC75BQ2VPJ9 315 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 CNPY1Q3B7I2 92 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 CCDC190Q86UF4 302 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 PRIMA1Q86XR5 153 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 H1FOOQ8IZA3 346 aaPredicted RBP11.67□□□□□ -0.54
USP11-212ENST00000497179 ZDHHC22Q8N966 263 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 OR6Q1Q8NGQ2 317 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 OR52I2Q8NH67 350 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 SSMEM1Q8WWF3 244 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 TOMM40LQ969M1 308 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 ST6GALNAC6Q969X2 333 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 RPEQ96AT9 228 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 GINS4Q9BRT9 223 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 C11orf54Q9H0W9 315 aaPredicted RBP11.67□□□□□ -0.54
USP11-212ENST00000497179 HILPDAQ9Y5L2 63 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 POMT1Q9Y6A1 747 aa11.67□□□□□ -0.54
USP11-212ENST00000497179 FABP12A6NFH5 140 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 GABARAPH6UMI1 98 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 CLDN34H7C241 214 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 HSD17B6O14756 317 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 VENTXO95231 258 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 IGHV4-59P01825 116 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 FCER2P06734 321 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 IER3P46695 156 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 DYNLT3P51808 116 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 RIPPLY3P57055 190 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 ZNF816Q0VGE8 651 aaPredicted RBP11.66□□□□□ -0.54
USP11-212ENST00000497179 SLC9A3R2Q15599 337 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 RNASE12Q5GAN4 147 aaKnown RBP11.66□□□□□ -0.54
USP11-212ENST00000497179 CCDC144NLQ6NUI1 221 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 ODF3L1Q8IXM7 274 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 LYG1Q8N1E2 194 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 OR5AP2Q8NGF4 316 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 FAM216AQ8WUB2 273 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 SMIM4Q8WVI0 70 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 AGMATQ9BSE5 352 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 NECAP2Q9NVZ3 263 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 MTFP1Q9UDX5 166 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 V9GYH0 126 aa11.66□□□□□ -0.54
USP11-212ENST00000497179 A0A1W2PPI3 338 aa11.65□□□□□ -0.54
USP11-212ENST00000497179 TXNL1O43396 289 aa11.65□□□□□ -0.54
USP11-212ENST00000497179 LANCL1O43813 399 aa11.65□□□□□ -0.54
USP11-212ENST00000497179 ARHGDIBP52566 201 aa11.65□□□□□ -0.54
USP11-212ENST00000497179 TAS2R46P59540 309 aa11.65□□□□□ -0.54
USP11-212ENST00000497179 ACTBP60709 375 aa11.65□□□□□ -0.54
USP11-212ENST00000497179 ACTG1P63261 375 aa11.65□□□□□ -0.54
USP11-212ENST00000497179 DGCR2P98153 550 aa11.65□□□□□ -0.54
USP11-212ENST00000497179 DIAPH2-AS1Q14236 149 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms