RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 BARX1Q9HBU1 254 aaPredicted RBP20.15■□□□□ 0.82
PPP1R3F-205ENST00000495799 UBR5O95071 2799 aaPredicted RBP20.14■□□□□ 0.82
PPP1R3F-205ENST00000495799 PIGBOS1A0A0B4J2F0 54 aa20.14■□□□□ 0.81
PPP1R3F-205ENST00000495799 C3orf85A0A1B0GTC6 90 aa20.14■□□□□ 0.81
PPP1R3F-205ENST00000495799 RAB7AP51149 207 aa20.14■□□□□ 0.81
PPP1R3F-205ENST00000495799 LOXL3P58215 753 aa20.14■□□□□ 0.81
PPP1R3F-205ENST00000495799 TMEM200BQ69YZ2 307 aa20.14■□□□□ 0.81
PPP1R3F-205ENST00000495799 OR5M8Q8NGP6 311 aa20.14■□□□□ 0.81
PPP1R3F-205ENST00000495799 PATZ1Q9HBE1 687 aaKnown RBP20.14■□□□□ 0.81
PPP1R3F-205ENST00000495799 RAB18Q9NP72 206 aa20.14■□□□□ 0.81
PPP1R3F-205ENST00000495799 DBX1A6NMT0 343 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 RNF212BA8MTL3 300 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 NDUFS7O75251 213 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 FCN3O75636 299 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 WNT2P09544 360 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 OR5AC1P0C628 307 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 EIF2B2P49770 351 aaKnown RBP20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 RAP2BP61225 183 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 ZNF273Q14593 569 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 ZNF841Q6ZN19 808 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 DMRTB1Q96MA1 342 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 PARP12Q9H0J9 701 aaKnown RBP20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 OR2D2Q9H210 308 aa20.13■□□□□ 0.81
PPP1R3F-205ENST00000495799 PHF1O43189 567 aaPredicted RBP20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 PGLYRP1O75594 196 aaPredicted RBP20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 OR2A4O95047 310 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 PDLIM4P50479 330 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 C11orf91Q3C1V1 193 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 ANKRD55Q3KP44 614 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 LGI3Q8N145 548 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 OR2A7Q96R45 310 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 FAM208BQ5VWN6 2430 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 OMGP23515 440 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 TMEM187Q14656 261 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 HEPN1Q6WQI6 88 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 LIAT1Q6ZQX7 453 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 CHIAQ9BZP6 476 aa20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 RPUSD1Q9UJJ7 312 aaKnown RBP20.12■□□□□ 0.81
PPP1R3F-205ENST00000495799 HRNRQ86YZ3 2850 aaPredicted RBP20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 F5H0A9 414 aaPredicted RBP20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 H0Y980 276 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 C1QBP02746 253 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 GNB2P62879 340 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 Q3ZCU0 254 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 WDR25Q64LD2 544 aaPredicted RBP20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 GSG1LQ6UXU4 331 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 DRAM1Q8N682 238 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 LRTM2Q8N967 370 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 PDCD10Q9BUL8 212 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 RANBP3Q9H6Z4 567 aaPredicted RBP20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 PSG11Q9UQ72 335 aa20.11■□□□□ 0.81
PPP1R3F-205ENST00000495799 IGHV4-39P01824 125 aa20.1■□□□□ 0.81
PPP1R3F-205ENST00000495799 F2RP25116 425 aa20.1■□□□□ 0.81
PPP1R3F-205ENST00000495799 NFYBP25208 207 aa20.1■□□□□ 0.81
PPP1R3F-205ENST00000495799 C2orf68Q2NKX9 166 aa20.1■□□□□ 0.81
PPP1R3F-205ENST00000495799 PRAMEF5Q5TYX0 476 aa20.1■□□□□ 0.81
PPP1R3F-205ENST00000495799 C8orf46Q8TAG6 207 aa20.1■□□□□ 0.81
PPP1R3F-205ENST00000495799 METTL8Q9H825 291 aaKnown RBP20.1■□□□□ 0.81
PPP1R3F-205ENST00000495799 LIN7CQ9NUP9 197 aaKnown RBP20.1■□□□□ 0.81
PPP1R3F-205ENST00000495799 IFNA21P01568 189 aa20.09■□□□□ 0.81
PPP1R3F-205ENST00000495799 GPR12P47775 334 aa20.09■□□□□ 0.81
PPP1R3F-205ENST00000495799 CATR1Q13166 79 aa20.09■□□□□ 0.81
PPP1R3F-205ENST00000495799 ABHD14AQ9BUJ0 271 aa20.09■□□□□ 0.81
PPP1R3F-205ENST00000495799 TMEM222Q9H0R3 208 aa20.09■□□□□ 0.81
PPP1R3F-205ENST00000495799 ST8SIA5O15466 376 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 TNFSF12O43508 249 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 SIX6O95475 246 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 IGLV2-14P01704 120 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 CCL3L1P16619 93 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 SSTR2P30874 369 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 H2BFSP57053 126 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 SRSF4Q08170 494 aaKnown RBP20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 SP6Q3SY56 376 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 ESCO2Q56NI9 601 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 NOXA1Q86UR1 476 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 ZNF295-AS1Q8N0V1 137 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 ZNF525Q8N782 197 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 OR2T35Q8NGX2 323 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 GLYATL2Q8WU03 294 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 TP53RKQ96S44 253 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 PIPOXQ9P0Z9 390 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 RNF150Q9ULK6 438 aa20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 USP9XQ93008 2570 aaPredicted RBP20.08■□□□□ 0.81
PPP1R3F-205ENST00000495799 C5orf51A6NDU8 294 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 FAM25EA8MYX2 175 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 UCP1P25874 307 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 CYCSP99999 105 aaKnown RBP20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 FAM53AQ6NSI3 398 aaPredicted RBP20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 ZNF66Q6ZN08 573 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 MSI2Q96DH6 328 aaKnown RBP20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 SSBP3Q9BWW4 388 aaPredicted RBP20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 PRR13Q9NZ81 148 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 GAB2Q9UQC2 676 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 MYO18BQ8IUG5 2567 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 hCG_1809904A0A1W2PP81 198 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 A0A1W2PPE2 198 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 DUXBA0A1W2PPF3 345 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 A0A1W2PR64 198 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 A0A1W2PRV1 198 aa20.07■□□□□ 0.8
PPP1R3F-205ENST00000495799 NDUFS8O00217 210 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms