RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 YPEL2Q96QA6 119 aa18.09■□□□□ 0.49
TRAF4-211ENST00000478021 CMSS1Q9BQ75 279 aaKnown RBP18.09■□□□□ 0.49
TRAF4-211ENST00000478021 RIMS4Q9H426 269 aaPredicted RBP18.09■□□□□ 0.49
TRAF4-211ENST00000478021 RNF167Q9H6Y7 350 aa18.09■□□□□ 0.49
TRAF4-211ENST00000478021 C12orf4Q9NQ89 552 aa18.09■□□□□ 0.49
TRAF4-211ENST00000478021 TRBV6-6A0A0A6YYG2 114 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 RGS11O94810 467 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 GADD45AP24522 165 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 HLA-DRB3P79483 266 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 IZUMO1Q8IYV9 350 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 C5orf56Q8N8D9 126 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 WIPF2Q8TF74 440 aaPredicted RBP18.08■□□□□ 0.48
TRAF4-211ENST00000478021 RAB3CQ96E17 227 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 EAF1Q96JC9 268 aaPredicted RBP18.08■□□□□ 0.48
TRAF4-211ENST00000478021 MMP27Q9H306 513 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 Q9N2K0 584 aa18.08■□□□□ 0.48
TRAF4-211ENST00000478021 PKD1L1Q8TDX9 2849 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 WNK1Q9H4A3 2382 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 A0A075B6Q4 140 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 LOC100506127A0A0U1RQW1 187 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 NOTOA8MTQ0 251 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 EBI3Q14213 229 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 NSUN5P1Q3KNT7 163 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 STEAP3Q658P3 488 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 ODF3L1Q8IXM7 274 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 OR10R2Q8NGX6 335 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 PARP12Q9H0J9 701 aaKnown RBP18.07■□□□□ 0.48
TRAF4-211ENST00000478021 OR1A1Q9P1Q5 309 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 SLC23A1Q9UHI7 598 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 KCNK7Q9Y2U2 307 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 MGAM2Q2M2H8 2515 aa18.07■□□□□ 0.48
TRAF4-211ENST00000478021 CMYA5Q8N3K9 4069 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 ST8SIA5O15466 376 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 TXNL1O43396 289 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 LANCL1O43813 399 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 SCTP09683 121 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 CLEC2LP0C7M8 214 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 CD36P16671 472 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 RAB6AP20340 208 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 CD1BP29016 333 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 MXD1Q05195 221 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 Q8N6K4 173 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 OR2AK2Q8NG84 335 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 OR2T10Q8NGZ9 312 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 KCTD7Q96MP8 289 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 CITED2Q99967 270 aaPredicted RBP18.06■□□□□ 0.48
TRAF4-211ENST00000478021 DAPK2Q9UIK4 370 aa18.06■□□□□ 0.48
TRAF4-211ENST00000478021 CD3GP09693 182 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 GNB3P16520 340 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 SDC2P34741 201 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 OR3A3P47888 321 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 C10orf99Q6UWK7 81 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 CENPVQ7Z7K6 275 aaPredicted RBP18.05■□□□□ 0.48
TRAF4-211ENST00000478021 TPRA1Q86W33 373 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 OR5AU1Q8NGC0 362 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 MRPL20Q9BYC9 149 aaKnown RBP18.05■□□□□ 0.48
TRAF4-211ENST00000478021 ATG5Q9H1Y0 275 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 IFI27L2Q9H2X8 130 aa18.05■□□□□ 0.48
TRAF4-211ENST00000478021 SAA2-SAA4A0A096LPE2 208 aa18.04■□□□□ 0.48
TRAF4-211ENST00000478021 NCBP2LA6PVI3 153 aaKnown RBP18.04■□□□□ 0.48
TRAF4-211ENST00000478021 RAB27BO00194 218 aa18.04■□□□□ 0.48
TRAF4-211ENST00000478021 FGF16O43320 207 aa18.04■□□□□ 0.48
TRAF4-211ENST00000478021 MOSP00540 346 aa18.04■□□□□ 0.48
TRAF4-211ENST00000478021 SAA2P0DJI9 122 aaPredicted RBP18.04■□□□□ 0.48
TRAF4-211ENST00000478021 SNRPBP14678 240 aaKnown RBP18.04■□□□□ 0.48
TRAF4-211ENST00000478021 MRPS15P82914 257 aaKnown RBP18.04■□□□□ 0.48
TRAF4-211ENST00000478021 LSAMPQ13449 338 aa18.04■□□□□ 0.48
TRAF4-211ENST00000478021 LY6G6FQ5SQ64 297 aa18.04■□□□□ 0.48
TRAF4-211ENST00000478021 CENPOQ9BU64 300 aa18.04■□□□□ 0.48
TRAF4-211ENST00000478021 MGAT4AQ9UM21 535 aa18.04■□□□□ 0.48
TRAF4-211ENST00000478021 METTL21EPA6NDL7 271 aa18.03■□□□□ 0.48
TRAF4-211ENST00000478021 MFNGO00587 321 aa18.03■□□□□ 0.48
TRAF4-211ENST00000478021 HSPA12AO43301 675 aa18.03■□□□□ 0.48
TRAF4-211ENST00000478021 TNFAIP8O95379 198 aa18.03■□□□□ 0.48
TRAF4-211ENST00000478021 HIST1H1DP16402 221 aaKnown RBP18.03■□□□□ 0.48
TRAF4-211ENST00000478021 SFXN4Q6P4A7 337 aa18.03■□□□□ 0.48
TRAF4-211ENST00000478021 TSPAN14Q8NG11 270 aa18.03■□□□□ 0.48
TRAF4-211ENST00000478021 MAFIPQ8WZ33 124 aa18.03■□□□□ 0.48
TRAF4-211ENST00000478021 A0A087WXM4 84 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 A0A1W2PRX2 142 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 FCGR3AP08637 254 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 ZNF833PQ6ZTB9 187 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 Q8N9W7 124 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 LGALS14Q8TCE9 139 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 PTX4Q96A99 478 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 NABP2Q9BQ15 211 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 LINC00527Q9UJ94 153 aa18.02■□□□□ 0.48
TRAF4-211ENST00000478021 IGKV1-6A0A0C4DH72 117 aa18.01■□□□□ 0.47
TRAF4-211ENST00000478021 ADARB2-AS1A8MUL3 147 aa18.01■□□□□ 0.47
TRAF4-211ENST00000478021 TRDCB7Z8K6 153 aa18.01■□□□□ 0.47
TRAF4-211ENST00000478021 ZBTB25P24278 435 aa18.01■□□□□ 0.47
TRAF4-211ENST00000478021 CEACAM6P40199 344 aa18.01■□□□□ 0.47
TRAF4-211ENST00000478021 RPL39P5Q59GN2 51 aa18.01■□□□□ 0.47
TRAF4-211ENST00000478021 NDUFA11Q86Y39 141 aa18.01■□□□□ 0.47
TRAF4-211ENST00000478021 ABHD14BQ96IU4 210 aa18.01■□□□□ 0.47
TRAF4-211ENST00000478021 NOL4LQ96MY1 436 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-211ENST00000478021 ZNF230Q9UIE0 474 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-211ENST00000478021 ELF5Q9UKW6 265 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-211ENST00000478021 TGFBR1P36897 503 aa18■□□□□ 0.47
TRAF4-211ENST00000478021 F2RL1P55085 397 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 521.8 ms